Query= MSMg01no070_l14.b1 MSMg01no070_l14.b1 CHROMAT_FILE:
MSMg01no070_l14.b1 PHD_FILE: MSMg01no070_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:53 2005
(371 letters)
>mm_chr15_89752747_89753518
Length = 772
Score = 677 bits (350), Expect = 0.0
Identities = 362/366 (98%), Gaps = 1/366 (0%)
Strand = Plus / Minus
Query: 5 gaattccactcatctcataaacaatctataggcactatcaactttattactaaaaaacat 64
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattccattcatcttataaacaatctataggcactatcaactttattactaaaaaacat 511
Query: 65 acagaaggcacagtaatgcatctttagaacaaggtgaaagaaacatttctacatttggat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 acagaaggcacagtaatgcatctttagaacaaggtgaaagaaacatttctacatttggat 451
Query: 125 ccagttaccaatcttattcattgtatctacttgttcaaggtcccacaagcagaaactggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccagttaccaatcttattcattgtatctacttgttcaaggtcccacaagcagaaactggc 391
Query: 185 taagttcacaaaagctgtaacactctggagtgtttatctgaaggaaatgaagtcaatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 taagttcacaaaagctgtaacactctggagtgtttatctgaaggaaatgaagtcaatata 331
Query: 245 aaatgcatcactatctacctatgtttattatgatattatttagaatact-aaagcatgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 330 aaatgcatcactatctacctatgtttattatgatattatttagaatactcaaagcatgaa 271
Query: 304 atcagctcaggtgccttcaactgatgatataatacagtctgtgaacactgaaatatttct 363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 270 atcagctcaggtgccttcaactgatgatataatacagcctgtgaacactgaaatatttct 211
Query: 364 taacag 369
||||||
Sbjct: 210 taacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_l14.g1 MSMg01no070_l14.g1 CHROMAT_FILE:
MSMg01no070_l14.g1 PHD_FILE: MSMg01no070_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:53 2005
(438 letters)
>mm_chr15_89609067_89609904
Length = 838
Score = 839 bits (434), Expect = 0.0
Identities = 437/438 (99%)
Strand = Plus / Plus
Query: 1 ccaggagataacattccagaatcagcattttatttcattggctctttatctcatgtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaggagataacattccagaatcagcattttatttcattggctctttatctcatgtaaaa 260
Query: 61 tattaaactcattttgtcctaaatattaggtcctcacagcaggttcatataaatcatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattaaactcattttgtcctaaatattaggtcctcacagcaggttcatataaatcatctc 320
Query: 121 ctgagctatgtcactgagtgataattaaacttgaaacaatattcgagaatttcctgtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagctatgtcactgagtgataattaaacttgaaacaatattcgagaatttcctgtcca 380
Query: 181 ctaagttaaaatatgaaggaattcctttttcctacatttccatattgttttctatgcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaagttaaaatatgaaggaattcctttttcctacatttccatattgttttctatgcttt 440
Query: 241 attgtccttttcactaattacatggttacttaaattatcttaggcttgtaaaattctact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtccttttcactaattacatggttacttaaattatcttaggcttgtaaaattctact 500
Query: 301 tgttgagagtagtattcccttaatctaaaaattatgagccctgaaaccaaccaggtcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttgagagtagtattcccttaatctaaaaattatgagccctgaaaccaaccaggtcagc 560
Query: 361 ttataacaactgtagttgctataaaaccaagttgtgacgcgggtcttattttctttacat 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagaacaactgtagttgctataaaaccaagttgtgacgcgggtcttattttctttacat 620
Query: 421 ttaacaaaaagacccaat 438
||||||||||||||||||
Sbjct: 621 ttaacaaaaagacccaat 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
