Query= MSMg01no072_h04.b1 MSMg01no072_h04.b1 CHROMAT_FILE:
MSMg01no072_h04.b1 PHD_FILE: MSMg01no072_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:12 2005
(364 letters)
>mm_chr15_51246528_51247293
Length = 766
Score = 574 bits (297), Expect = e-168
Identities = 335/363 (92%), Gaps = 28/363 (7%)
Strand = Plus / Minus
Query: 5 gaattctctgtg-tttcatggctcagatatgtggtatctttggtatgctctcatggtcaa 63
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaattctctgtgcttt-atggctcagatatgtggtatctttggtatgctctcatggtcaa 487
Query: 64 attctagagggcaaccaagaaacatagaaatagactatatggaacctcattgatgaacaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 attctagagggcaaccaagaaacatagaaatagactatatggaacctcattgatgaacaa 427
Query: 124 --ccccccaaaataatccatcccaggcctttataggtgaggactgttgccttgttatggg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccccccccaaaataatccatcccaggcctttataggtgaggactgttgccttgttatggg 367
Query: 182 gccaactctattttaaatgtatgtatgtacacacacatctctatatattatgtattatct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gccaactctattttaaatgtatgtatgtacacacacatctctatatattatgtattatct 307
Query: 242 atctataatcaatctatcaatctatcaatcaatctatctatctatctatctatctatcta 301
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 306 atctataatcaatctatcaatc--------aatctatctatctatctatctatctatcta 255
Query: 302 tctatctatctatctatcaatcacctatctacctatcatctgtatttctatttacctagg 361
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tc----------------aatcacctatctacctatcatctgtatttctatttacctagg 211
Query: 362 gaa 364
|||
Sbjct: 210 gaa 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 766
Length adjustment: 9
Effective length of query: 355
Effective length of database: 757
Effective search space: 268735
Effective search space used: 268735
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_h04.g1 MSMg01no072_h04.g1 CHROMAT_FILE:
MSMg01no072_h04.g1 PHD_FILE: MSMg01no072_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:12 2005
(629 letters)
>mm_chr15_51113561_51114589
Length = 1029
Score = 1118 bits (578), Expect = 0.0
Identities = 617/630 (97%), Gaps = 2/630 (0%)
Strand = Plus / Plus
Query: 1 ctcactaccatggactgtcagccacattgctttcctcagggtatgttattacagaagtaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ctcactaccatggactgtcagccacattgcttttctcagggtatgttattacagaagtaa 260
Query: 61 gaacagaaattaagatgttatccctgcaagggagaaactagaagagactgggctgaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacagaaattaagatgttatccctgcaagggagaaactagaagagactgggctgaactg 320
Query: 121 aaaaacaaaaccataaatgatcacctacataaagtcaccacacagataacttgaatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaacaaaaccataaatgatcacctacataaagtcaccacacagataacttgaatttgg 380
Query: 181 gtaacagaagaaagggacattttccagccacttatataatggcattcatgtatggtgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaacagaagaaagggacattttccagccacttatataatggcattcatgtatggtgttc 440
Query: 241 tctgtccacccctgtccttttctatttttacaagtgttggaaaaaattactgtcataatt 300
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tctgtccacccctgtccttttctctttttaccagtgttggaaaaaattactgtcataatt 500
Query: 301 atcagaagatttggttatgggtcataaaatgcgtgagaaatttttgaattggaccatatt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 atcagaagatttggttatgggtcataaaatgcttgagaaatttttgaattggaccatatt 560
Query: 361 tcctaaatgcctgtcatccacgagattgaggaaagtaattcatttcataggttgagttcg 420
||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct: 561 tcctaaatgcctgtcatccacaagattcaggaaagtaattcatttcatagtttgagttct 620
Query: 421 atgaatagattcctcaataaacctgttatatacttcatagtagattaggggtcttaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 atgaatagattcctcaataaacctgttatatacttcatagtagattatgggtcttaaaat 680
Query: 481 caaattataatgcattgaatatgatagattgtctaaattgaaaattaaaacatgtttagt 540
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 caaattataatgcatttaatatgatatattgtctaaattgaaaattaaaacatgtttagt 740
Query: 541 taggtttcgttggtatatatcaaatgcga-gttccctcaaaccatgactagaccaggaat 599
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 741 taggtttcgttggtatatatcaaatg-gaagttccctcaaaccatgactagaccaggaat 799
Query: 600 atgaatgatatcaatacttatttttctgga 629
||||||||||||||||||||||||||||||
Sbjct: 800 atgaatgatatcaatacttatttttctgga 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
