Query= MSMg01no074_m20.b1 MSMg01no074_m20.b1 CHROMAT_FILE:
MSMg01no074_m20.b1 PHD_FILE: MSMg01no074_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:17 2005
(564 letters)
>mm_chr15_89752531_89753494
Length = 964
Score = 1038 bits (537), Expect = 0.0
Identities = 558/565 (98%), Gaps = 2/565 (0%)
Strand = Plus / Minus
Query: 1 aatctataggcactatcaactttattactaaaaaacatacagaaggcacagtaatgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aatctataggcactatcaactttattactaaaaaacatacagaaggcacagtaatgcatc 705
Query: 61 tttagaacaaggtgaaagaaacatttctacatttggatccagttaccaatcttattcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tttagaacaaggtgaaagaaacatttctacatttggatccagttaccaatcttattcatt 645
Query: 121 gtatctacttgttcaaggtcccacaagcagaaactggctaagttcacaaaagctgtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtatctacttgttcaaggtcccacaagcagaaactggctaagttcacaaaagctgtaaca 585
Query: 181 ctctggagtgtttatctgaaggaaatgaagtcaatataaaatgcatcactatctacctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctctggagtgtttatctgaaggaaatgaagtcaatataaaatgcatcactatctacctat 525
Query: 241 gtttattatgatattatttagaatact-aaagcatgaaatcagctcaggtgccttcaact 299
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 524 gtttattatgatattatttagaatactcaaagcatgaaatcagctcaggtgccttcaact 465
Query: 300 gatgatataatacagtctgtgaacactgaaatatttcttaacagcaaagaagtgaaatta 359
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 464 gatgatataatacagcctgtgaacactgaaatatttcttaacagtaaataagtgaaatta 405
Query: 360 tatcatgtgcagtttggagctgagtaaggctcaaacaagatatttcatttgtggaagcat 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 404 tatcatgtgcagtttggagctgagtaaggctcaaacaaaatatttcatttgtgaaagca- 346
Query: 420 ttttttaacagactttaaggtaaaagagggcctattagggaagataaaggaactgggggc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttttttaacagactttaaggtaaaagagggcctattagggaagataaaggaactgggggc 286
Query: 480 aaggagacaagagggacagtgggagagaggggagaacttgatcataacacaataaatgct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aaggagacaagagggacagtgggagagaggggagaacttgatcataacacaataaatgct 226
Query: 540 tgcatggagattaatctccttgcat 564
|||||||||||||||||||||||||
Sbjct: 225 tgcatggagattaatctccttgcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_m20.g1 MSMg01no074_m20.g1 CHROMAT_FILE:
MSMg01no074_m20.g1 PHD_FILE: MSMg01no074_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:17 2005
(312 letters)
>mm_chr15_89609369_89610080
Length = 712
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%)
Strand = Plus / Plus
Query: 1 ttgagagtagtattcccttaatctaaaaattatgagccctgaaaccaaccaggtcagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagagtagtattcccttaatctaaaaattatgagccctgaaaccaaccaggtcagctt 260
Query: 61 agaacaactgtagttgctataaaaccaagttgtgacgcgggtcttattttctttacattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacaactgtagttgctataaaaccaagttgtgacgcgggtcttattttctttacattt 320
Query: 121 aacaaaaagacccaatggtttctcaaggccatgccaacccagtgttctagctatttgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaaaaagacccaatggtttctcaaggccatgccaacccagtgttctagctatttgcaa 380
Query: 181 ataaactgcctggaaatatcacagctgttatgacaaaaatcagagaaattctgctagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaactgcctggaaatatcacagctgttatgacaaaaatcagagaaattctgctagaga 440
Query: 241 ataatatcaagtagtcttttttgaagaggtagaaagaaatggatttgtgttcagtgttat 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatatcaagtagtctttttagaagaggtagaaagaaatggatttgtgttcagtgttat 500
Query: 301 aattttatgttc 312
||||||||||||
Sbjct: 501 aattttatgttc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
