Query= MSMg01no075_f13.b1 MSMg01no075_f13.b1 CHROMAT_FILE:
MSMg01no075_f13.b1 PHD_FILE: MSMg01no075_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:59 2005
(337 letters)
>mm_chr15_30569682_30570418
Length = 737
Score = 592 bits (306), Expect = e-173
Identities = 330/338 (97%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 1 acaaaaaacctgaagggttgacaatttcctcccgtttgaaaggcgagagtgggcagcttt 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 201 acaaaaaacctgaagggttgacaatttcctcccgtttg-aaggcgagagtggacagcttt 259
Query: 61 gtccatacttgtgtgaacttctgagctctaca-acacatatcccaagaaagcagaattat 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 260 gtccatacttgtgtgaacttctgagctctacacacacatatcccaagaaagcagaatcat 319
Query: 120 ttctctaaagtttcagtcagcacagaactgatggtcctaaattatctcactggaaggttc 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 ttctctaaagtttcagtcagcacagaactgatggccctaaattatctcactggaaggttc 379
Query: 180 tcagtgagacatcagtgtctccggagtggtccctgcaaggccttccttcattccggcttc 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagtgagacatcagtgtctctggagtggtccctgcaaggccttccttcattccggcttc 439
Query: 240 cctgattccctggaagaggacacatcagtcattaacttactctctctactttgtcattat 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctgagtccctggaagaggacacatcagtcattaacttactctctctactttgtcattat 499
Query: 300 gtagaccacatggtgttaagatagtttctgcaaatgcc 337
|||||||||| |||||||||||||||||||||||||||
Sbjct: 500 gtagaccacacggtgttaagatagtttctgcaaatgcc 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_f13.g1 MSMg01no075_f13.g1 CHROMAT_FILE:
MSMg01no075_f13.g1 PHD_FILE: MSMg01no075_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:59 2005
(341 letters)
>mm_chr15_30707376_30708116
Length = 741
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Minus
Query: 1 ctatcagagtttgcacatttgtgtgtgtgtatgttcatccacacacgcgtatctccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 ctatcagagtttgcacatttgtgtgtgtgtatgttcatccacacacgcgtatctctctgt 482
Query: 61 gtgactgcagaatgggggcctgctccacttcatgttctcagagcagtcaaagtctggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgactgcagaatgggggcctgctccacttcatgttctcagagcagtcaaagtctggccc 422
Query: 121 tcagttctacaccaccctggtgttccttctcatccagctcctgggaatcagaggacaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcagttctacaccaccctggtgttccttctcatccagctcctgggaatcagaggacaacc 362
Query: 181 atcatggccaccaggaatcaaggatgggaggacaatggcgaggaggagtgctccaatgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcatggccaccaggaatcaaggatgggaggacaatggcgaggaggagtgctccaatgat 302
Query: 241 gatatgaattatccttcaagtacgagctgttggagaaaactccaaatgctgagacttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatatgaattatccttcaagtacgagctgttggagaaaactccaaatgctgagacttggc 242
Query: 301 acagggagctcaatgactgacacagcaaatgctaagaggta 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagggagctcaatgactgacacagcaaatgctaagaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
