Query= MSMg01no078_i14.b1 MSMg01no078_i14.b1 CHROMAT_FILE:
MSMg01no078_i14.b1 PHD_FILE: MSMg01no078_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:53 2005
(322 letters)
>mm_chr15_102736298_102737019
Length = 722
Score = 561 bits (290), Expect = e-164
Identities = 314/322 (97%)
Strand = Plus / Plus
Query: 1 agagcagcaagtattctttatgctaagctacctctctagcccctatatactttttaaaaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 agagcagcaagtattctttatgctaagctacctctctatcccctatatactttttaaaaa 260
Query: 61 atgaattcaaagatttgaaattaacccagagaaatgatgccttgtagccatacatgttgg 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 atgaattcaaagattggaaattaacccagagaaatgatgccttgtagccatacatgatgg 320
Query: 121 aacaattcaatcatccatacaatgtactctctccaaagatgaaagtagtttccagatgca 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaattcaatcatccacacaatgtactctctccaaagatgaaagtagtttccagatgca 380
Query: 181 ttgaggtgctaatggtgaacatggaaatacttcctggcctcttatataaaacaaattccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaggtgctaatggtgaacatggaaatacttcctggcctcttatataaaacaaattccc 440
Query: 241 aagtctggatgatttttacccatggacttaaatgttttctgtttgcatatataacatgtc 300
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 aagtctggatgaatcttacccatggacttaaatgttttctgtttgcatatataacaagtc 500
Query: 301 tctctctagctaatcctcagag 322
|| |||||||||||||||||||
Sbjct: 501 tccctctagctaatcctcagag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_i14.g1 MSMg01no078_i14.g1 CHROMAT_FILE:
MSMg01no078_i14.g1 PHD_FILE: MSMg01no078_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:53 2005
(242 letters)
>mm_chr15_102914276_102914917
Length = 642
Score = 402 bits (208), Expect = e-117
Identities = 234/243 (96%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 cctgtcttgactcagtaacagacgtt-cngctgtgatgaagaagacaggacttctgccct 59
|||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 442 cctgtcttgactcagtaacaga-gttacagctgtgatgaagaagacaggacttctgccct 384
Query: 60 gtgcctattgagcatcgtaaaagatgacacaaatatgtctgtgagggtaaagggacactt 119
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgcctattgagcatcgtagaagaagacacaaatatgtctgtgagggtaaagggacactt 324
Query: 120 gccattggcaggacatatggggcacctatcctagactagaaggtcttcacaatgacacag 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 gccattggcaggacatatggggcacctatcctagactagaagggcttcacaatgacacag 264
Query: 180 gaaaggcatctctcagtcttcccccaaaggatatgaacactatctaccatgtgccaggga 239
| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 263 ggaaggcatctctcagtcttccaccaaaggatatggacactatctaccatgtgccaggga 204
Query: 240 aaa 242
|||
Sbjct: 203 aaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
