Query= MSMg01no080_b13.b1 MSMg01no080_b13.b1 CHROMAT_FILE:
MSMg01no080_b13.b1 PHD_FILE: MSMg01no080_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:54 2005
(338 letters)
>mm_chr15_30569682_30570418
Length = 737
Score = 600 bits (310), Expect = e-176
Identities = 331/338 (97%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 acaaaaaacctgaagggttgacaatttcctcccgtttgaaaggcgagagtgggcagcttt 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 201 acaaaaaacctgaagggttgacaatttcctcccgtttg-aaggcgagagtggacagcttt 259
Query: 61 gtccatacttgtgtgaacttctgagctctacacacacatatcccaagaaagcagaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 gtccatacttgtgtgaacttctgagctctacacacacatatcccaagaaagcagaatcat 319
Query: 121 ttctctaaagtttcagtcagcacagaactgatggtcctaaattatctcactggaaggttc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 ttctctaaagtttcagtcagcacagaactgatggccctaaattatctcactggaaggttc 379
Query: 181 tcagtgagacatcagtgtctccggagtggtccctgcaaggccttccttcattccggcttc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagtgagacatcagtgtctctggagtggtccctgcaaggccttccttcattccggcttc 439
Query: 241 cctgattccctggaagaggacacatcagtcattaacttactctctctactttgtcattat 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctgagtccctggaagaggacacatcagtcattaacttactctctctactttgtcattat 499
Query: 301 gtagaccacatggtgttaagatagtttctgcaaatgcc 338
|||||||||| |||||||||||||||||||||||||||
Sbjct: 500 gtagaccacacggtgttaagatagtttctgcaaatgcc 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_b13.g1 MSMg01no080_b13.g1 CHROMAT_FILE:
MSMg01no080_b13.g1 PHD_FILE: MSMg01no080_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:54 2005
(422 letters)
>mm_chr15_30707299_30708120
Length = 822
Score = 770 bits (398), Expect = 0.0
Identities = 413/418 (98%)
Strand = Plus / Minus
Query: 1 ctatcagagtttgcacatttgtgtgtgtgtatgttcatccacacacgcgtatctccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 618 ctatcagagtttgcacatttgtgtgtgtgtatgttcatccacacacgcgtatctctctgt 559
Query: 61 gtgactgcagaatgggggcctgctccacttcatgttctcagagcagtcaaagtctggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtgactgcagaatgggggcctgctccacttcatgttctcagagcagtcaaagtctggccc 499
Query: 121 tcagttctacaccaccctggtgttccttctcatccagctcctgggaatcagaggacaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcagttctacaccaccctggtgttccttctcatccagctcctgggaatcagaggacaacc 439
Query: 181 atcatggccaccaggaatcaaggatgggaggacaatggcgaggaggagtgctccaatgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtcatggccaccaggaatcaaggatgggaggacaatggcgaggaggagtgctccaatgat 379
Query: 241 gatatgaattatccttcaagtacgagctgttggagaaaactccaaatgctgagacttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gatatgaattatccttcaagtacgagctgttggagaaaactccaaatgctgagacttggc 319
Query: 301 acagggagctcaatgactgacacagcaaatgctaagaggtagcagaggcagctcatacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 318 acagggagctcaatgactgacacagcaaatgctaagaggtagcagaggcagctcaaacac 259
Query: 361 agcaaaacaaggaacatatctgtccatgtgtgcacacacacatatacatatagacttg 418
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 258 agcaaaacaaggaacatatctgtccatgtgtgcacacacgcacatacatatagacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
