TCAAAATTGCGGCCCGNAAAGANNCCATTTCCACCGCAAGNGGAANNNAN
AAATGCTTNGACCGAGGNGNGNNNNNCAGNAAGGAACCGAGAGNAGAGAG
GNGTTTTCCCCCCAAGAAAAGNGGGCGGNCGGCGGNNNCGGNNGNGGNNG
AAGNACAGCCCAAACCCACGGCAANCGGACAGAACGGAGGGCAGGAGACC
AACCCCCCAAGGCCGGCCGAGGACCACCGAGCGCCCGACTTTTTTTTCAG
CCNCAGAGAACACACCGGGACATGGCGCGACAAAGGCACAGCCCNCCCCC
CGGTTTTTAGTGTTTTNGCAGCACACGCCAAACCGCNCAGGGACAGAACC
CCCCCCCCCCCCAAAGAAGAACGGAGGCAAGCCACGCCACCGAAAAGCAG
CCCAACGACGAGAGAGAAAAACGAGCGGAGAGAACGAAGGGGGGAACAAG
CCCCCCCGCACCACCACCAGGCGCCCAGCGCGCGCCCAGAGACCCAGCAA
AGCGACGCCCAAGAAAGCGAACGCCCCCGCACNAGACGCCCCCACGCCCA
AAAACGAGACGGCAAACCAGAGGACNGCCCCAGAAAACCGAAGAGCGGCC
ACCAACCCCAGACAGAAACGGGAGGCCCGGACCCCAAAACCNCGTTTTTT
TTTTTTGCCCGCACCAAGCCGCCCCCACGGGCTGG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGCATCACTACTTGTCCTTGATATAAATC
CTTACGCAGCATGATTACTAAATTAGTGAATAATCCACTTCAGACAGTAG
TCAAGAAGATATGGAAGAACTTCAAGGTCAATGGAATGTACATAGAATAG
CTGAAAGTAGTTTAAATGACTTAGTAGAGACACATTTCTGATTCTATAAA
TATATTGGTAAATATTTATTACATATTAAATTTATATTAGAAGATAGATC
TAATAAAATTTATTTTAAAACAGAATCTTCTACTGAAGTCATTCATAAAT
TGTGTATATTGTTAGCATTTTCAGTCATCAACTTGACATGCATTTTTGTC
TCCATGGATCTAGTGTTGTAAATCGACACAAATCCTTTCTATGTCCATAT
ATTCATGCTATGCTCTATTAGAATTATCTGATGTTCCTATGATAGGGCAG
GTCCAGTGAACTTGAATCAGACATGTTAGTGTGTTTCTCACATCTTACTT
TAAGGAAACATTTTAATTTACATACAGATTTCCGACTGAAAAGAAATGAT
AGTGTCATTATCAGAACCACAATAATTACAATAAACTTTAAAATCTGATG
TCTTCTACCAAAACTAGCATTGATATAAAGAGAAGAAATTCTCAAA

Query= MSMg01no082_e08.g1 MSMg01no082_e08.g1 CHROMAT_FILE:
MSMg01no082_e08.g1 PHD_FILE: MSMg01no082_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:42 2005
         (618 letters)



>mm_chr15_22230957_22231974
          Length = 1018

 Score = 1083 bits (560), Expect = 0.0
 Identities = 601/620 (96%), Gaps = 10/620 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatcactacttgtccttgatataaatccttacgcagcatgattactaaattagtgaat 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 207 agcatcactacttgtccttgatataaatccttatgcagcatgattactaaattagtgaat 266

                                                                       
Query: 61  aatccacttcagacagtagtcaagaagatatggaagaacttcaaggtcaatggaatgtac 120
           |||||||| ||||||||||        |||||||||||||||||||||||||||||||||
Sbjct: 267 aatccactacagacagtag--------atatggaagaacttcaaggtcaatggaatgtac 318

                                                                       
Query: 121 atagaatagctgaaagtagtttaaatgacttagta--gagacacatttctgattctataa 178
           |||||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 319 atagaatagctgcaagtagtttaaatgacttactactgagacacatttctgattctataa 378

                                                                       
Query: 179 atatattggtaaatatttattacatattaaatttatattagaagatagatctaataaaat 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atatattggtaaatatttattacatattaaatttatattagaagatagatctaataaaat 438

                                                                       
Query: 239 ttattttaaaacagaatcttctactgaagtcattcataaattgtgtatattgttagcatt 298
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 ttattttaaaacagaatcttctactgaactcattcataaattgtgtatattgttagcatt 498

                                                                       
Query: 299 ttcagtcatcaacttgacatgcatttttgtctccatggatctagtgttgtaaatcgacac 358
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 499 ttcagtcatcaacttgacatgcatttttgcctccatggatctagtgttgtaaatcgacac 558

                                                                       
Query: 359 aaatcctttctatgtccatatattcatgctatgctctattagaattatctgatgttccta 418
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaatcttttctatgtccatatattcatgctatgctctattagaattatctgatgttccta 618

                                                                       
Query: 419 tgatagggcaggtccagtgaacttgaatcagacatgttagtgtgtttctcacatcttact 478
           |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 619 tgatagcgcaggtccagtgaacttgaatcagacatgttagtgtgtttctcatatcttact 678

                                                                       
Query: 479 ttaaggaaacattttaatttacatacagatttccgactgaaaagaaatgatagtgtcatt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttaaggaaacattttaatttacatacagatttccgactgaaaagaaatgatagtgtcatt 738

                                                                       
Query: 539 atcagaaccacaataattacaataaactttaaaatctgatgtcttctaccaaaactagca 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atcagaaccacaataattacaataaactttaaaatctgatgtcttctaccaaaactagca 798

                               
Query: 599 ttgatataaagagaagaaat 618
           ||||||||||||||||||||
Sbjct: 799 ttgatataaagagaagaaat 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)