Query= MSMg01no082_l07.b1 MSMg01no082_l07.b1 CHROMAT_FILE:
MSMg01no082_l07.b1 PHD_FILE: MSMg01no082_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:14 2005
(525 letters)
>mm_chr15_80431045_80431969
Length = 925
Score = 953 bits (493), Expect = 0.0
Identities = 511/517 (98%)
Strand = Plus / Minus
Query: 9 ttcaaggccagcctcaactacacagtgagttcaaggccagccagagttatacatcaaggc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttcaaggccagcctcaactacacagtgagttcaaggccagccagagttatacatcaaggc 497
Query: 69 cttgccccaaataaacaaaacaacatagatcacagtgacagcacgctggacaggcagctt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cttgccccaaataaacaaaacaacatagatcacagtgacagcacgctggacaggcagctt 437
Query: 129 gaaactctaacaagggaggcctcagtttacttaaggaggagcctgagaccatggggggtc 188
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 436 gaaactctaacaagggaggcctcagtttacttaaggaggagcctgagaccatggtgggtc 377
Query: 189 ttttagaggtagtgaggcttcaactagggtcatgaagatttcctgagaggacaacacaac 248
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 376 ttttagaggtagtgaggcttcaactagggtcatgaagacttcctgagaggacaacacaac 317
Query: 249 catgcagggcatagaaaacaagggtgttgctgggtgtttgtggcacacacctttattccc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 catgcagggcatagaaaacaagggtgttgctgggtgtttgtggcacacacctttattccc 257
Query: 309 agcacttgggaggcagaggcaggtggatctctgagttcaaggccaacctggtccacagag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcacttgggaggcagaggcaggtggatctctgagttcaaggccaacctggtccacagag 197
Query: 369 agagttccaggacagccagggctacaccgagaaaccctgtctcgcaaaacaaaaagcagt 428
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 196 agagttccaggacagccagggctacactgagaaaccctgtctcacaaaacaaaaagcagt 137
Query: 429 taggcaaggaattaaggaattgctacaaagagttgggagactctggtcaaaccatcacta 488
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 136 taggcaaggaattaaggaattgctacaaagagttgggagactctggccaaaccatcacta 77
Query: 489 ggggcgtctagagtgagataaagagacacttcagtta 525
|||||||| ||||||||||||||||||||||||||||
Sbjct: 76 ggggcgtccagagtgagataaagagacacttcagtta 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_l07.g1 MSMg01no082_l07.g1 CHROMAT_FILE:
MSMg01no082_l07.g1 PHD_FILE: MSMg01no082_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:14 2005
(353 letters)
>mm_chr15_80302556_80303308
Length = 753
Score = 607 bits (314), Expect = e-178
Identities = 349/372 (93%), Gaps = 19/372 (5%)
Strand = Plus / Plus
Query: 1 tgagtgcttgtgagaacactccaagaaaa-aagatgggagtctgacgaccccagcttctt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 182 tgagtgcttgtgagaacactccaagaaaacaagatgggagtctgacgaccccagcttctt 241
Query: 60 cagaacatggattgtccttggaatgtcatttgtgctcctcccaggtgcagtggacaggag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagaacatggattgtccttggaatgtcatttgtgctcctcccaggtgcagtggacaggag 301
Query: 120 tgggtttatctcagattactttttattgctcactgttgttattcaattaactg------- 172
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgggtttatctcagattactttttattgctcactgttgttattcaattaactgttgttat 361
Query: 173 -----------cctctatgaaaaacatgctttcgttggtccttgtggatgtacactgaac 221
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 362 tcaattaactgcctctatgaaaaacatgctttcgttggtccttgtggttgtacactgaac 421
Query: 222 tcatgtgattctctttaacccttagagtacaaattgtccgatgctctgagtaaagttggt 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcatgtgattctctttaacccttagagtacaaattgtccgatgctctgagtaaagttggt 481
Query: 282 tattgcatgatactttggtcccactcatttatcggctccattctcccaggttccacagcc 341
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tattgcatgagactttggtcccactcatttatcggctccattctcccaggttccacagcc 541
Query: 342 ttcacactggta 353
|| | |||||||
Sbjct: 542 tttagactggta 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
