Query= MSMg01no083_d04.b1 MSMg01no083_d04.b1 CHROMAT_FILE:
MSMg01no083_d04.b1 PHD_FILE: MSMg01no083_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:51 2005
(189 letters)
>mm_chr15_3364235_3364824
Length = 590
Score = 350 bits (181), Expect = e-101
Identities = 184/185 (99%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 6 gaattctgtttcttttctttctga-ccactagtttaaccacacagactgctgactgtgat 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgtttcttttctttctgaaccactagtttaaccacacagactgctgactgtgat 265
Query: 65 tggcataaaatcccacgctgggatctacaggtggttaatgatatagtcagtttctcaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tggcataaaatcccacgctgggatctacaggtggttaatgatatagtcagtttctcaagc 325
Query: 125 ctgttggaggcattaatgtccaggctttgagtaggcatttttgggggtgtttttgtttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgttggaggcattaatgtccaggctttgagtaggcatttttgggggtgtttttgtttat 385
Query: 185 ggatc 189
|||||
Sbjct: 386 ggatc 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 590
Length adjustment: 8
Effective length of query: 181
Effective length of database: 582
Effective search space: 105342
Effective search space used: 105342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_d04.g1 MSMg01no083_d04.g1 CHROMAT_FILE:
MSMg01no083_d04.g1 PHD_FILE: MSMg01no083_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:52 2005
(278 letters)
>mm_chr15_3536198_3536875
Length = 678
Score = 538 bits (278), Expect = e-157
Identities = 278/278 (100%)
Strand = Plus / Minus
Query: 1 cctgatttgagatgatccaggaagggctccagagagaaagtaaacagttgagctggactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctgatttgagatgatccaggaagggctccagagagaaagtaaacagttgagctggactt 419
Query: 61 gaaagctgggatggattactgtgggagaacaaagcagggtgttctaggcagaatggagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaaagctgggatggattactgtgggagaacaaagcagggtgttctaggcagaatggagca 359
Query: 121 tatgagttaaacacaatctcgctttcattacttgatgagtaaactatactcatcacaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tatgagttaaacacaatctcgctttcattacttgatgagtaaactatactcatcacaaag 299
Query: 181 tagtcacctcagggcctgatacatttccccttcctaaatggaaaatatataaagcactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tagtcacctcagggcctgatacatttccccttcctaaatggaaaatatataaagcactta 239
Query: 241 catatggtcatacatgagatatttgtttctggagttaa 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 catatggtcatacatgagatatttgtttctggagttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
