XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
GTTTAAACTGTGCATCCTTTATTTTTGGTCATAAAATGTGACAACTAGGT
TGGAGCTGAGGAACATGGGAATTTTGCATTTCAGTTGAATCTGAGCTGTG
AATGGTATCTTTTAAAAGTAGTGATTCTCAGGGAACACTTCCTTAAGAAA
TAATTTTGAGCAGAGATTCAAAGCCTCTAAAACAACAACAACAATAACAA
CAACAACAACAAGAACCCCATCCAGGTCTTTCCATGTCTTTATTTATGTA
TCTAAGAGAGGCAAGCTTCAGTTATTTAGGAAGAATGACTCAGGGCAATT
AGAAGGGGGATGGAGGTGGAAGNNTNNTNTNTNTTNTTTTTGNGTTTTGG
TTTTGGTCCCCCTTGTTCTCCCTTCCTGTTGTTGCCCCGGTTTCCTTTTC
CCTCTCTTTTTGTGGTGTGGGGCTCTGCGTTTTGGTCTTTTTTCTTTCTC
TGTTTATGCCTTTGTATAGGGGGTCCCTGATCGCGCGTTTTTTGTGTTTA
TATATCTGTCTTTTCGGATTGATTTCTGCCTTTCTGTTTCTTTGTCGTTC
GCTCTTGTTTGTTTCTCGCCTTCTTCCCGCCTTTCTTCTCTTGCGTGTCC
GGCGTCGCCGTGTTTACCTTTTCTCCTCCCTTTCTGTTCTTGTTTTTCTT
CTGTTTAGGCGGCTTGGAGATTCATGCTTG

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTCCTAGCAATTAGTCAAGGAAGAAGAAAGC
AAACACAAAACAATTCAAGGAGAACCAGCCCTGCAATTGCCTCCCACATG
CTAAAATTATCTATAGAGAATATCTTAATGTGCAGATTAATTATTGGGTC
GATAACAGAACAGCAAGCTTTGTAGATAAATAAAACTGATGTATAAATTC
AACCAAACTCTATAAGTCAGCTTAGAAAGTGTAACAGTTAAAAAAAAAAT
AGGGCATTTAAAGCAGCATTAAAACATAGAAAAGCTGTGCTGAAGCGATG
GCTCAGCAGTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAA
TCCCAGCATCCACATGGTGGCTCACAACCATCTGTACTTGAGATCTGATG
CCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACAATCAATCA
ATCAATAAATCTTTTAAAAAACACAGAAAAGCTAGAACTACTATTAACTA
AATCTTAAACTTCATCAAGACACAAAATGCAATGGAAAGTAGTTTCACAC
AACAAACAAAAGGAAAACCTACTACAGCATTGGGAAGTCTGTATTCAAAG
GATATTCAATCTTTCCAAATTTAGTTTTGGATTTAATGTCAATAATAACC
AACAGACC

Query= MSMg01no083_j05.b1 MSMg01no083_j05.b1 CHROMAT_FILE:
MSMg01no083_j05.b1 PHD_FILE: MSMg01no083_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:20 2005
         (336 letters)



>mm_chr15_90677524_90678259
          Length = 736

 Score =  623 bits (322), Expect = 0.0
 Identities = 328/330 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagtttaaactgtgcatcctttatttttggtcataaaatgtgacaactaggttg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggaattcagtttaaactgtgcatcctttatttttggtcataaaatgtgacaactaggttg 332

                                                                       
Query: 64  gagctgaggaacatgggaattttgcatttcagttgaatctgagctgtgaatggtatcttt 123
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gagctgaggaacatgggaagtttgcatttcagttgaatctgagctgtgaatggtatcttt 272

                                                                       
Query: 124 taaaagtagtgattctcagggaacacttccttaagaaataattttgagcagagattcaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 taaaagtagtgattctcagggaacacttccttaagaaataattttgagcagagattcaaa 212

                                                                       
Query: 184 gcctctaaaacaacaacaacaataacaacaacaacaacaagaaccccatccaggtctttc 243
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 211 gcctctaaaacaacaacaacaataacaacaacaacaagaagaaccccatccaggtctttc 152

                                                                       
Query: 244 catgtctttatttatgtatctaagagaggcaagcttcagttatttaggaagaatgactca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 catgtctttatttatgtatctaagagaggcaagcttcagttatttaggaagaatgactca 92

                                         
Query: 304 gggcaattagaagggggatggaggtggaag 333
           ||||||||||||||||||||||||||||||
Sbjct: 91  gggcaattagaagggggatggaggtggaag 62


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space:   237729
Effective search space used:   237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no083_j05.g1 MSMg01no083_j05.g1 CHROMAT_FILE:
MSMg01no083_j05.g1 PHD_FILE: MSMg01no083_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:20 2005
         (621 letters)



>mm_chr15_90578416_90579436
          Length = 1021

 Score = 1154 bits (597), Expect = 0.0
 Identities = 615/621 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcctagcaattagtcaaggaagaagaaagcaaacacaaaacaattcaaggagaaccagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctagcaattagtcaaggaagaagaaagcaaacacaaaacaattcaaggagaaccagc 260

                                                                       
Query: 61  cctgcaattgcctcccacatgctaaaattatctatagagaatatcttaatgtgcagatta 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 cctgcaattgcctcccacatgctaaaattatctatagagaatatcttaatgtacagatta 320

                                                                       
Query: 121 attattgggtcgataacagaacagcaagctttgtagataaataaaactgatgtataaatt 180
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attattggatcgatgacagaacagcaagctttgtagataaataaaactgatgtataaatt 380

                                                                       
Query: 181 caaccaaactctataagtcagcttagaaagtgtaacagttaaaaaaaaaatagggcattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaccaaactctataagtcagcttagaaagtgtaacagttaaaaaaaaaatagggcattt 440

                                                                       
Query: 241 aaagcagcattaaaacatagaaaagctgtgctgaagcgatggctcagcagttaagagcac 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 aaagcagcattaaaacatagaaaagctgtgctgaagcgatggcttagcagttaagagcac 500

                                                                       
Query: 301 tgactgctcttctgaaggtcctgagttcaaatcccagcatccacatggtggctcacaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgactgctcttctgaaggtcctgagttcaaatcccagcatccacatggtggctcacaacc 560

                                                                       
Query: 361 atctgtacttgagatctgatgccctcttctggagtgtctgaagacagctacagtgtactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctgtacttgagatctgatgccctcttctggagtgtctgaagacagctacagtgtactt 620

                                                                       
Query: 421 acaatcaatcaatcaataaatcttttaaaaaacacagaaaagctagaactactattaact 480
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 acaatcaatcaatcaatcaatcttttaaaaaacacagaaaaactagaactactattaact 680

                                                                       
Query: 481 aaatcttaaacttcatcaagacacaaaatgcaatggaaagtagtttcacacaacaaacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatcttaaacttcatcaagacacaaaatgcaatggaaagtagtttcacacaacaaacaa 740

                                                                       
Query: 541 aaggaaaacctactacagcattgggaagtctgtattcaaaggatattcaatctttccaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaggaaaacctactacagcattgggaagtctgtattcaaaggatattcaatctttccaaa 800

                                
Query: 601 tttagttttggatttaatgtc 621
           |||||||||||||||||||||
Sbjct: 801 tttagttttggatttaatgtc 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)