Query= MSMg01no086_k17.b1 MSMg01no086_k17.b1 CHROMAT_FILE:
MSMg01no086_k17.b1 PHD_FILE: MSMg01no086_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:30 2005
(232 letters)
>mm_chr15_81892487_81893118
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Plus
Query: 1 gaagactgtcagacaacagtgggacacccagtatctgctgtctccgcagaagccatgtca 60
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 201 gaagactgtcagacaacagtgggacactcagtatctgctgtctctgcagaagccatgtca 260
Query: 61 agacctgccttgggatgtccatacctctactgagcccattttttgtacctcttccttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacctgccttgggatgtccatacctctactgagcccattttttgtacctcttccttttc 320
Query: 121 aaacacttgtcttctccctcaggacagttcttgggaagcatggcagttaccctggtaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacacttgtcttctccctcaggacagttcttgggaagcatggcagttaccctggtaccc 380
Query: 181 cagagatagccaggtccacccatccctggctatatgccaaagaacggagcag 232
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagatagccaggcccacccatccctggctatatgccaaagaacggagcag 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_k17.g1 MSMg01no086_k17.g1 CHROMAT_FILE:
MSMg01no086_k17.g1 PHD_FILE: MSMg01no086_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:30 2005
(516 letters)
>mm_chr15_82043116_82044031
Length = 916
Score = 804 bits (416), Expect = 0.0
Identities = 432/438 (98%), Gaps = 2/438 (0%)
Strand = Plus / Minus
Query: 1 caggctgctttgatctctatgcctctgtccccttacttaaaaaagcagggactcgctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 436 caggctgctttgatctctatgcctctgtccccttacttaaaaaagcagggaatcgctcat 377
Query: 61 ccaaggttgccaagatccgaatccccagagcttaagctgagccccctcgagggcccaatt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 376 ccaaggttgccaagatccgaatccccagatcttaagctgagccccctcgagggcccaatt 317
Query: 121 ccgacaacagtttgagggaggtcttggagagggtccctggtggggcgcgcttgctgcact 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 316 ccgacaacagtttgagggaggtcttggagagggtccctggtcgggcgcgcttgctgcact 257
Query: 181 gaccttacagaacccctccctcccggcgcagcggccgcgctcctcccccggttctgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaccttacagaacccctccctcccggcgcagcggccgcgctcctcccccggttctgcctc 197
Query: 241 cctcccgccctcctcccctcgctccctctcccgcccgcccgagcccgcgccgagcccgcg 300
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 196 cctcccgccctcctcccctcgctcc--ctcccgcccgcccgagcccgcgccgagcccgcg 139
Query: 301 ccggagccggagccggagccagagcgcgggcaccgcggagcgggcggcgggaagacagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ccggagccggagccggagccagagcgcgggcaccgcggagcgggcggcgggaagacagag 79
Query: 361 gtgtccagcgacccgccgcccggcgcagtctccaaaagacccaggccccgcacgccctcc 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 gtgtccggcgacccgccgcccggcgcagtctccaaaagacccaggccccgcacgccctcc 19
Query: 421 cgggtcagagggagctgg 438
||||||||||||||||||
Sbjct: 18 cgggtcagagggagctgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
