Query= MSMg01no087_g10.b1 MSMg01no087_g10.b1 CHROMAT_FILE:
MSMg01no087_g10.b1 PHD_FILE: MSMg01no087_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:31 2005
(216 letters)
>mm_chr15_18410727_18411340
Length = 614
Score = 317 bits (164), Expect = 3e-91
Identities = 203/216 (93%), Gaps = 2/216 (0%)
Strand = Plus / Plus
Query: 1 gactggatccttatctctgaagacacagagaagattctgcataaagcatcctgtaagtct 60
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 201 gactggatccttctctctgaagacacagagaagactctgcataaagcatcctgtaagttt 260
Query: 61 agtagcattagaattcattccgacgattaacagtacctttccaacattatcccgtacttc 120
||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 261 agtagcattagaattcattccaacgatcaacagtaccttgccaacattatcccgtacttc 320
Query: 121 ttcagccttatcataaatatatatatagctttgtctacttatttggacttccttttccct 180
|||||||||| |||||| | | |||||| |||||||| ||||||||||||||||||||||
Sbjct: 321 ttcagccttagcataaa-a-agatatagttttgtctatttatttggacttccttttccct 378
Query: 181 gtgaaggctgtgttgttacatttaacattaaatcag 216
|||||||||||| |||||||||||||||||||||||
Sbjct: 379 gtgaaggctgtggtgttacatttaacattaaatcag 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 614
Length adjustment: 9
Effective length of query: 207
Effective length of database: 605
Effective search space: 125235
Effective search space used: 125235
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_g10.g1 MSMg01no087_g10.g1 CHROMAT_FILE:
MSMg01no087_g10.g1 PHD_FILE: MSMg01no087_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:31 2005
(232 letters)
>mm_chr15_25864339_25864970
Length = 632
Score = 402 bits (208), Expect = e-117
Identities = 226/232 (97%)
Strand = Plus / Plus
Query: 1 gacaaagctcagaggtgggcacagttactgtgttggtttttacagagttgctatttttgg 60
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacaaagctcagagataggcacagttactgtgttggtttttacagagttgctatttttgg 260
Query: 61 ctgaaaagaaggttttgaggaaaatcctcctgtgcgatgcttccagaaaagataaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaaaagaaggttttgaggaaaatcctcctgtgcgatgcttccagaaaagataaagtca 320
Query: 121 cattgggtggagtctgttgtaggcaagagaattctgtattagccccaggtgaccatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 cattgggtggagtctgttgtaggcaagagaattctgtattagccccaggggaccatgagc 380
Query: 181 aggaagagaaggatctctcttaccctgagtcaggacactgagggtggacatg 232
||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaagagaaggaccacgcttaccctgagtcaggacactgagggtggacatg 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
