Query= MSMg01no088_a08.b1 MSMg01no088_a08.b1 CHROMAT_FILE:
MSMg01no088_a08.b1 PHD_FILE: MSMg01no088_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:21 2005
(137 letters)
>mm_chr15_83835648_83836181
Length = 534
Score = 203 bits (105), Expect = 3e-57
Identities = 129/137 (94%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 1 tacagttaaggaggcataaaaggaaaaaacaggcaaaggccccggctgttcatgttgtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 334 tacagttaaggaggcataaaaggaaaaaacaggcaaaggccccggctgttcacgttgtgt 275
Query: 61 ggctttccaagttaaagagactctcataagtagaaaggattccaggacttgcggtatttg 120
|||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |
Sbjct: 274 ggctttccaagttaaagaaactctcagaagtagaaaggattccaggacttg-ggtatccg 216
Query: 121 tcgatgtctggaacatc 137
| |||| ||||||||||
Sbjct: 215 t-gatg-ctggaacatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 534
Length adjustment: 8
Effective length of query: 129
Effective length of database: 526
Effective search space: 67854
Effective search space used: 67854
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_a08.g1 MSMg01no088_a08.g1 CHROMAT_FILE:
MSMg01no088_a08.g1 PHD_FILE: MSMg01no088_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:21 2005
(441 letters)
>mm_chr15_83687137_83687977
Length = 841
Score = 775 bits (401), Expect = 0.0
Identities = 431/441 (97%)
Strand = Plus / Plus
Query: 1 cgacagcccccggccaggcctagagcaaatggcttggcttagttccccattccttcctca 60
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 201 cgacagcccccggccaggcctagagcagatggcttggcttagtcccccattccttcctca 260
Query: 61 ggaccctgctgccaatgtggacaatggctgagtgtctccagcttctggctcagaacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaccctgctgccaatgtggacaatggctgagtgtctccagcttctggctcagaacctgg 320
Query: 121 atttggggaggggagctttgttcttctgggtggccagaacctgctggtttctcatcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 atttggggaggggagctttgttcttctgggtggccagaacctgctggttactcatcacag 380
Query: 181 tgaggccatcttagatcatctgggaccacactactttgtagatcatgatggccaggggat 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 tgaggccatcttagatcatctgggaccacactactttgtagatcacgatggccaggggat 440
Query: 241 tctgtgggctgagatgtatgcctggccatgtacatgccccatgtctgtggcatgtgtgtg 300
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtgggctgagacctatgcctggtcatgtacatgccccatgtctgtggcatgtgtgtg 500
Query: 301 cttctccaaacctaaccaggttgttagcatctacaacgagctccatcctccatgtgattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttctccaaacctaaccaggttgttagcatctacaacgagctccatcctccatgtgattg 560
Query: 361 atttttccttccgagggttccaggaagcttgtcagtaacaccaccaaccgggaggtggcg 420
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 561 atttttccttccgagggttccaggaagcttgtcagtaccaccagtaaccgggaggtggcg 620
Query: 421 cagttacagagccaccccggg 441
|||||||||||||||||||||
Sbjct: 621 cagttacagagccaccccggg 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
