MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-090O14
Chromosome	15 (Build37)
Map Location	22,907,574 - 22,907,770
singlet/doublet	singlet
Overlap gene	Cdh18
Upstream gene	EG545091
Downstream gene	LOC624863
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG545091 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545091 MGI:3645633
definition	note : predicted gene, EG545091 pseudo : _no_value

name	Cdh18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320865 MGI:1344366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC624863 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	Cdh18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266440 GeneID:320865 MGI:1344366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : cadherin 18 transcript_id : XM_001487793.1

name	Cdh18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266441 GeneID:320865 MGI:1344366
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : cadherin 18 protein_id : XP_001487843.1 transl_except : (pos:22865386..22865388,aa:OTHER) transl_except : (pos:22865407..22865409,aa:OTHER) transl_except : (pos:22865437..22865439,aa:OTHER) transl_except : (pos:22865449..22865451,aa:OTHER) transl_except : (pos:22865494..22865496,aa:OTHER) transl_except : (pos:22865506..22865508,aa:OTHER) transl_except : (pos:22865560..22865562,aa:OTHER) transl_except : (pos:22865605..22865607,aa:OTHER) transl_except : (pos:22866684..22866686,aa:OTHER) transl_except : (pos:22866723..22866725,aa:OTHER) transl_except : (pos:22866741..22866743,aa:OTHER) transl_except : (pos:22966128..22966130,aa:OTHER) transl_except : (pos:22966248..22966250,aa:OTHER) transl_except : (pos:22966296..22966298,aa:OTHER)

name	LOC624863 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266442 GeneID:624863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins product : similar to 23 kD highly basic protein pseudo : _no_value transcript_id : XR_031878.1

clone name	MSMg01-526F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-045F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-090O14.T7 (MSMg01no090_o14.b1)	MSMg01-090O14.TJ (MSMg01no090_o14.g1)
ACC	AG309005	AG309006
length	718	705
length of high quality (start - end)	140 (48 - 187)	199 (75 - 273)
definition	CHROMAT_FILE: MSMg01no090_o14.b1 PHD_FILE: MSMg01no090_o14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:44:14 2005	CHROMAT_FILE: MSMg01no090_o14.g1 PHD_FILE: MSMg01no090_o14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:44:14 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCCCCTACACTGGGGCATCCATCTATTCACAGGACCTAGAGCCTC TCCTCCCAGTGATGTCTGACAACCCCAAGCTCTGCTACATGTGCAGCTGA AGCCATGAGTCCCTTCATGTATACTCCTTGGTTGGTGGCTTAGTCCCTGA GAGCATTGGGGCATCTGGTTGGTTAATATTGTTGTTCTTCCTATGGGGTT GTAGACCCCTTCAGGTCCTTCAGTCCTTTCTCTAGCTCCTTCATTGTTGA CCCTGTGCTTAGTCCAATGTTTGTCTTCAAGCGTCCAACTCTGGACTTGG CTGACTCTGTTTTTTTTTCTCACCACACCGCTATAGTAAGGTCCTGTCAT GATGGACTTCTGTGGATCTAGAATAATGTCAGGGTTTGTTGAGTGTAGTA TGGAGGGGTCCCCGAGTTGTGTGAATCTGCTGGATGAGCATTTTATTCAG TCATCTGTTCCGCGCTGTGAGGCCGTATGTTGTTCCTTGTGATATTTTGG GACCCACTATCTAGAGATGGAATCCGTAAAGCTATCTGACCCGTAAAAAC ACACCTAGGGCCACATTAGCTATTATCTTAGAAATATGTGAACGTTATTA ATTTATAGCCTATTATTCCGTCATCATCTATCGCGTGCCGTGCCTGAGAA AAAAAAATATGAATAAAG	CCCAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXACCTTACTGCTGCAGTTATTTCTGTC AATTTTTCCCCAAATTTAGTGCTTTTCTGAAGTCATGAAACATGTCTGCA TTACCACATAACATTAGAATAACTGGAAGATTGCTATGTTTTTTAATAAA CTTAATATTTTCTTTTTTATAAAAATAAGGAAGTGTAATCAAAGATTACA GAAATTACCTCTAAAAGAAAACGACAGTGAGTGACTCAGTAGTAAACACA TAGCTATTATTTATTTGGTAAACTACATAGGCAGTAGTTATGTATTTTTA GTCCTTTACCTCCTACCTGAAACACATCTAATTCAGCATTTCTCAAGGAA AGTGTTTTTTGTATGTTATACATAATAGTGAGATAATTTTTGGATGTGAA GTTGCGCTTATGTGACTCATGCATTTATTACTGTCAATATATATACATAT ACTTATGTATATATATATATGTGTGCGTGTGTGCTGCATCTTCTACCCAT ACCTCCAATTATATAACTATCTTATTAACAATATAAACACACCCACCCCC CAACATAAACATCAATAATTCCCATCTTACACTTCTAAAATACTTCCATC ACTACACCAATAAATACTAAACACTCCCACTCACCCCCACACAATTCAAT TACAT
quality values	Open. Hide. 6 8 10 6 7 7 7 7 10 21 22 30 21 19 19 17 22 28 32 30 27 25 27 30 30 28 30 24 28 24 26 28 28 29 28 18 20 20 23 34 39 47 37 36 36 42 42 42 43 42 39 34 42 40 42 48 46 54 46 42 27 19 14 11 13 19 15 14 26 26 41 48 48 47 42 42 32 42 43 54 37 37 29 29 29 37 40 41 48 48 37 43 40 42 35 42 42 42 48 57 57 57 59 59 43 37 36 36 36 36 48 48 48 48 37 37 37 31 23 17 9 9 9 9 12 18 18 27 24 28 35 37 37 39 39 33 43 33 33 33 34 39 39 39 32 35 35 39 43 32 32 20 20 20 28 26 30 27 17 17 24 32 42 48 46 43 42 39 39 39 43 43 42 42 48 47 47 47 47 34 33 25 15 12 10 10 10 19 24 24 23 12 11 11 16 23 23 23 11 11 11 11 11 11 21 21 21 14 19 19 12 13 18 22 24 30 18 18 15 18 15 12 12 11 15 21 21 28 37 43 54 42 32 32 20 20 28 41 42 43 43 43 37 28 24 20 10 10 15 12 10 10 8 12 19 12 12 19 27 24 30 16 16 11 11 12 32 20 22 19 12 18 12 12 13 19 21 24 28 28 25 18 23 19 11 11 15 21 23 22 23 22 30 12 17 11 11 11 17 18 28 31 27 24 15 15 10 15 13 24 12 12 12 15 17 17 18 19 13 15 15 16 13 13 14 18 22 19 11 11 12 12 22 26 17 8 8 6 6 10 10 21 14 15 15 15 22 24 21 11 12 12 12 15 16 10 15 8 9 9 11 15 18 28 24 24 13 16 10 10 9 9 10 11 6 6 6 6 6 6 10 13 19 10 8 8 8 8 8 9 11 12 15 15 15 19 11 11 11 11 11 13 12 11 11 11 11 15 18 10 8 7 7 10 8 9 9 10 8 8 6 6 10 11 15 14 15 12 12 12 12 11 11 10 8 8 8 8 8 8 15 13 14 14 19 11 11 7 7 8 8 10 11 8 8 8 8 8 8 8 8 10 15 11 10 10 8 10 10 8 8 8 6 6 8 8 8 6 7 8 10 10 10 10 8 8 8 8 8 8 8 11 9 9 9 9 9 10 10 9 9 11 11 9 9 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 11 12 12 15 15 15 12 12 11 9 8 8 8 10 10 10 8 11 8 8 8 10 10 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 11 11 8 8 8 8 8 8 8 10 9 9 9 9 9 12 8 8 8 9 8 8 8 8 8 8 10 8 6 6 6 6 8 8 9 9 9 8 8 6 6 8 8 9 10 10 11 12 11 11 11 11 10 10 10 10 10 11 11 12 11 9 9 8 8 10 10 6 6 8 8 10 10 8 8 8 6 6 8 6 6 8 8 8 8 8 8 9 11 11 11 15 15 15 16 11 8 8 10 8 8 6 7 6 6 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 9 8 8 8 8 8 8 8 8 6 6 8 6 9 13 12 12 11 11 11 10 10 8 8 8 8 8 8 8 10 8 8	Open. Hide. 7 7 7 9 9 12 10 12 9 17 16 12 10 10 13 17 22 28 30 30 37 37 30 30 32 32 32 30 41 30 23 10 6 6 6 6 6 6 10 10 15 19 19 25 23 25 21 21 11 11 11 23 23 34 31 22 16 16 8 6 6 6 8 9 21 13 11 10 8 10 9 10 16 19 33 30 33 41 50 44 44 53 47 47 36 42 39 39 30 30 32 30 32 36 34 33 42 34 34 34 43 43 37 39 47 47 48 48 32 32 32 32 31 28 37 30 30 22 18 12 10 10 10 13 18 32 33 37 37 30 29 29 24 22 28 28 34 39 39 36 36 43 43 48 48 48 48 42 33 27 27 25 25 28 30 26 30 30 33 37 37 37 37 28 28 13 12 16 25 23 35 32 28 36 24 19 20 14 14 15 21 19 29 39 41 42 42 41 41 39 42 42 44 44 47 57 57 57 44 42 42 31 28 28 35 35 43 43 44 44 44 39 39 37 37 37 43 39 39 36 32 28 20 20 28 30 32 28 23 27 36 36 43 43 43 39 36 33 37 28 32 35 42 28 28 29 29 21 25 19 24 24 28 35 39 39 43 48 59 48 48 47 39 35 35 32 32 32 22 17 9 9 9 17 16 20 20 20 28 29 25 20 20 24 32 28 24 18 15 16 15 11 11 11 18 18 24 26 16 20 15 15 10 10 10 14 26 37 39 30 30 28 28 23 23 19 18 12 12 12 23 23 35 31 32 23 26 26 24 20 20 20 28 32 34 25 20 20 28 29 29 18 24 17 31 29 37 28 26 26 16 21 22 22 22 16 23 16 15 15 13 13 13 13 13 14 14 14 15 12 12 8 8 8 8 8 8 10 22 15 16 12 18 12 12 12 12 13 28 28 48 43 47 32 32 30 28 28 23 23 23 23 24 20 18 13 12 9 10 12 21 29 29 19 15 13 10 10 10 12 12 15 15 15 13 13 13 15 15 24 11 11 11 11 11 13 15 22 25 15 10 8 8 8 8 10 10 15 15 9 9 9 8 8 8 8 13 17 31 28 28 24 14 14 15 16 18 21 21 18 18 12 14 13 21 20 21 10 10 10 10 13 9 9 9 9 12 23 23 30 30 25 25 16 16 12 10 8 8 8 8 6 6 8 10 16 12 12 12 12 16 16 18 11 11 11 12 12 10 12 13 13 15 18 9 8 8 8 10 13 9 8 8 6 6 8 8 9 9 9 9 8 8 8 10 8 8 6 6 8 8 8 8 8 9 8 8 6 6 8 8 8 6 6 6 6 8 8 7 7 8 6 8 8 9 11 8 8 8 8 10 9 10 10 8 8 8 6 6 6 8 9 8 8 6 6 10 8 8 8 8 8 8 8 11 11 11 11 10 9 9 9 9 9 9 12 16 12 11 11 11 8 8 6 6 8 8 9 10 10 13 10 9 10 10 13 10 11 8 8 8 8 8 8 10 10 9 9 8 10 6 6 6 6 8 8 10 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 7 8 8 8 8 8 6 6 8 8 8 8 8 8 9 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no090_o14.g1 MSMg01no090_o14.g1 CHROMAT_FILE:
MSMg01no090_o14.g1 PHD_FILE: MSMg01no090_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:14 2005
         (199 letters)



>mm_chr15_22907374_22907972
          Length = 599

 Score =  358 bits (185), Expect = e-103
 Identities = 194/197 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   accttactgctgcagttatttctgtcaatttttccccaaatttagtgcttttctgaagtc 60
           ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 201 accttactgctgcagttatttctgtcaatctttccccaaatttagtgtttttctgaagtc 260

                                                                       
Query: 61  atgaaacatgtctgcattaccacataacattagaataactggaagattgctatgtttttt 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 atgaaacatgtctgcattaccacataacattaaaataactggaagattgctatgtttttt 320

                                                                       
Query: 121 aataaacttaatattttcttttttataaaaataaggaagtgtaatcaaagattacagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaacttaatattttcttttttataaaaataaggaagtgtaatcaaagattacagaaa 380

                            
Query: 181 ttacctctaaaagaaaa 197
           |||||||||||||||||
Sbjct: 381 ttacctctaaaagaaaa 397


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space:   112881
Effective search space used:   112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information