Query= MSMg01no091_e21.b1 MSMg01no091_e21.b1 CHROMAT_FILE:
MSMg01no091_e21.b1 PHD_FILE: MSMg01no091_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:46 2005
(239 letters)
>mm_chr15_7123235_7123873
Length = 639
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%), Gaps = 1/237 (0%)
Strand = Plus / Minus
Query: 1 agatttaaaattatttactttaattattacaat-aaaattataaatgaatatattaatta 59
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 510 agatttaaaattatttactttaattcttacaataaaaattataaatgaatatattaatta 451
Query: 60 attaatataaaattgagaaaacctctaaagaaaataaacagtaaacactaatccgtgcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 attaatataaaattgagaaaacctctaaagaaaataaacagtaaacactaatccgtgcag 391
Query: 120 tcaccttttaggagttatttttattgtggttatttatagacactgcctggtaacagtggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcaccttttaggagttatttttattgtggttatttatagacactgcctggtaacagtggc 331
Query: 180 tcacctctctcagtcacattgatgaccactgctgactgtgcctgccccagtggattg 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tcacctctctcagtcacattgatgaccactgctgactgtgcctgccccagtggattg 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_e21.g1 MSMg01no091_e21.g1 CHROMAT_FILE:
MSMg01no091_e21.g1 PHD_FILE: MSMg01no091_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:46 2005
(293 letters)
>mm_chr15_6966392_6967084
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Plus
Query: 1 aaagaaggaagaaggagttggcttgcctttgctaggaaaaattgaagagcctttgtctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aaagaaggaagaaggagttggcttgcctttgctaggaaaaattgaagagcctttgcctga 260
Query: 61 agaacagtgtcacgctgaagagactgaagaacagattggtgtttaccagcctcagccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacagtgtcacgctgaagagactgaagaacagattggtgtttaccagcctcagccaga 320
Query: 121 aaaactgtatacctatagtctctgaagaaaaaaacaaacaacaacaacaaaaacaagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaactgtatacctatagtctctgaagaaaaaaacaaacaacaacaacaaaaacaagcca 380
Query: 181 aagtcacaaggagaatgtgaacagacacaagcaaagcaaagctcaatactaagaaatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtcacaaggagaatgtgaacagacacaagcaaagcaaagctcaatactaagaaatttg 440
Query: 241 aatttgcaaagagaaagcaagttaaagaagcccaaggcagaagaagaaggagg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttgcaaagagaaagcaagttaaagaagcccaaggcagaagaagaaggagg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
