MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-093I02
Chromosome	15 (Build37)
Map Location	11,833,786 - 11,833,990
singlet/doublet	singlet
Overlap gene	Npr3
Upstream gene	C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars, LOC100039772
Downstream gene	LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109, 6030458C11Rik, Rnasen
Link	Open Mouse BAC browser

Click to get alignment info.

name	C1qtnf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81799 MGI:1932136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amacr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17117 MGI:1098273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc45a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22293 MGI:2153040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rxfp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239336 MGI:2441827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamts12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239337 MGI:2146046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110960 MGI:106314
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039772 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Npr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18162 MGI:97373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC381002 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs

name	Sub1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20024 MGI:104811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040027 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Zfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22763 MGI:1341890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040052 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs, 3 Proteins

name	LOC100040066 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Mtmr12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268783 MGI:2443034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039846 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Golph3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66629 MGI:1913879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68070 MGI:1922394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040109 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 4129 ESTs, 21 Proteins

name	6030458C11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77877 MGI:1925127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnasen (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14000 MGI:1261425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qtnf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366188 GeneID:81799 MGI:1932136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 3 transcript_id : NM_030888.3

name	Amacr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381661 GeneID:17117 MGI:1098273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha-methylacyl-CoA racemase transcript_id : NM_008537.4

name	Slc45a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803377 GeneID:22293 MGI:2153040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 45, member 2 transcript_id : NM_053077.3

name	Rxfp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386187 GeneID:239336 MGI:2441827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin family peptide receptor 3 transcript_id : NM_178717.3

name	Adamts12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29789428 GeneID:239337 MGI:2146046
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 transcript_id : NM_175501.1

name	Tars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802320 GeneID:110960 MGI:106314
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : threonyl-tRNA synthetase transcript_id : NM_033074.3

name	LOC100039772 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266404 GeneID:100039772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039772 transcript_id : XM_001473482.1

name	Npr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702367 GeneID:18162 MGI:97373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : natriuretic peptide receptor 3 transcript_id : NM_001039181.1

name	Npr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702361 GeneID:18162 MGI:97373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : natriuretic peptide receptor 3 transcript_id : NM_008728.2

name	Sub1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130230 GeneID:20024 MGI:104811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SUB1 homolog (S. cerevisiae) transcript_id : NM_011294.3

name	LOC100040027 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266416 GeneID:100040027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to Crx opposite strand transcript 1 transcript_id : XM_001474103.1

name	Zfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106452 GeneID:22763 MGI:1341890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger RNA binding protein transcript_id : NM_011767.1

name	LOC100040052 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266420 GeneID:100040052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs, 3 Proteins product : similar to CGI-140 protein transcript_id : XM_001474178.1

name	LOC100040066 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266422 GeneID:100040066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to ribosomal protein S29 transcript_id : XM_001474195.1

name	Mtmr12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129923 GeneID:268783 MGI:2443034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 12 transcript_id : NM_172958.3

name	Golph3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542902 GeneID:66629 MGI:1913879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi phosphoprotein 3 transcript_id : NM_025673.2

name	Pdzd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486715 GeneID:68070 MGI:1922394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZ domain containing 2 transcript_id : NM_001081064.1

name	LOC100040109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266428 GeneID:100040109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 116 mRNAs, 2785 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase, transcript variant 2 transcript_id : XM_001474369.1

name	LOC100040109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266426 GeneID:100040109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 4127 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase, transcript variant 1 transcript_id : XM_001474341.1

name	LOC100040109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266430 GeneID:100040109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 91 mRNAs, 1770 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase, transcript variant 3 transcript_id : XM_001474390.1

name	6030458C11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381499 GeneID:77877 MGI:1925127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030458C11 gene transcript_id : NM_029998.2

name	Rnasen (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54873614 GeneID:14000 MGI:1261425
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease III, nuclear transcript_id : NM_026799.2

name	C1qtnf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13562098 CCDS:CCDS27380.1 GeneID:81799 MGI:1932136
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : collagenous repeat-containing sequence product : collagenous repeat-containing protein_id : NP_112150.1

name	Amacr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46518506 CCDS:CCDS27381.1 GeneID:17117 MGI:1098273
definition	EC_number : 5.1.99.4 GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0008111 - alpha-methylacyl-CoA racemase activity [Evidence TAS]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0008300 - isoprenoid catabolism [Evidence TAS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : alpha-methylacyl-Coenzyme A racemase; 2-arylpropionyl-CoA epimerase product : alpha-methylacyl-CoA racemase protein_id : NP_032563.2

name	Slc45a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716355 CCDS:CCDS27382.1 GeneID:22293 MGI:2153040
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006583 - melanin biosynthesis from tyrosine [Evidence IEA]; GO:0048066 - pigmentation during development [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : B/AIM-1-like protein; dominant brown; underwhite product : membrane associated transporter protein protein_id : NP_444307.1

name	Rxfp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520143 CCDS:CCDS27383.1 GeneID:239336 MGI:2441827
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC] GO_function : GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0051482 - elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor SALPR; somatostatin and angiotensin-like peptide receptor; relaxin-3/INSL7 receptor 1 product : relaxin 3 receptor 1 protein_id : NP_848832.1

name	Adamts12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789429 CCDS:CCDS27384.1 GeneID:239337 MGI:2146046
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : a disintegrin-like and metalloprotease with thrombospondin type 1 motif, 12; metalloprotease disintegrin 12 product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 12 protein_id : NP_780710.1

name	Tars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229277 CCDS:CCDS27385.1 GeneID:110960 MGI:106314
definition	GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : threonyl-tRNA synthetase protein_id : NP_149065.2

name	LOC100039772 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266405 GeneID:100039772
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473532.1

name	Npr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702368 GeneID:18162 MGI:97373
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; longjohn; strigosus; Nppc receptor product : natriuretic peptide receptor 3 isoform b protein_id : NP_001034270.1

name	Npr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702362 CCDS:CCDS27386.1 GeneID:18162 MGI:97373
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; longjohn; strigosus; Nppc receptor product : natriuretic peptide receptor 3 isoform a protein_id : NP_032754.2

name	Sub1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755364 CCDS:CCDS27387.1 GeneID:20024 MGI:104811
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : RNA polymerase II transcriptional coactivator protein_id : NP_035424.1

name	LOC100040027 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266417 GeneID:100040027
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474153.1

name	Zfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106453 GeneID:22763 MGI:1341890
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger RNA binding protein protein_id : NP_035897.1

name	LOC100040052 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266421 GeneID:100040052
definition	codon_start : 1 product : similar to CGI-140 protein protein_id : XP_001474228.1

name	LOC100040066 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266423 GeneID:100040066
definition	codon_start : 1 product : similar to ribosomal protein S29 protein_id : XP_001474245.1

name	Mtmr12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370470 CCDS:CCDS27388.1 GeneID:268783 MGI:2443034
definition	GO_function : GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA] GO_process : GO:0046839 - phospholipid dephosphorylation [Evidence IEA] codon_start : 1 note : phosphatidylinositol-3 phosphate 3-phosphatase adaptor subunit product : phosphatidylinositol-3-phosphatase associated protein protein_id : NP_766546.1

name	Golph3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14140240 CCDS:CCDS27389.1 GeneID:66629 MGI:1913879
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : golgi phosphoprotein 3 protein_id : NP_079949.1

name	Pdzd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486716 GeneID:68070 MGI:1922394
definition	GO_component : GO:0030054 - cell junction [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : PDZ domain containing 3 protein_id : NP_001074533.1

name	LOC100040109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266427 GeneID:100040109
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase isoform 1 protein_id : XP_001474391.1

name	LOC100040109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266429 GeneID:100040109
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase isoform 2 protein_id : XP_001474419.1

name	LOC100040109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266431 GeneID:100040109
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase isoform 3 protein_id : XP_001474440.1

name	6030458C11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037511 CCDS:CCDS27392.1 GeneID:77877 MGI:1925127
definition	codon_start : 1 product : hypothetical protein LOC77877 protein_id : NP_084274.1

name	Rnasen (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54873615 GeneID:14000 MGI:1261425
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004525 - ribonuclease III activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : ethanol induced 2 product : ribonuclease III protein_id : NP_081075.2

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 1 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 2 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 3 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 4 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 5 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 6 pseudo : _no_value

name	LOC100039846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039846
definition	number : 7 pseudo : _no_value

name	LOC381002 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266406 GeneID:381002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs product : hypothetical LOC381002 transcript_id : XR_035213.1

clone name	MSMg01-519L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486N20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-357A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132C12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-093I02.T7 (MSMg01no093_i02.b1)	MSMg01-093I02.TJ (MSMg01no093_i02.g1)
ACC	AG310935	AG310936
length	1,436	1,193
length of high quality (start - end)	---	208 (53 - 260)
definition	CHROMAT_FILE: MSMg01no093_i02.b1 PHD_FILE: MSMg01no093_i02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:48:13 2005	CHROMAT_FILE: MSMg01no093_i02.g1 PHD_FILE: MSMg01no093_i02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:48:13 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TATGCGCGCTATAGATCATAAGGGAGAGGATCCGCGGAATTCCACGCGAC TGGCCCCCCTAAAGTGCGTTTGGAGTAGAGGAAAGTGGGAATGTCCCCTT GAAGGTGCCCTATTGCCCCTCATATATTCTCTTTGGAAAGTATGATTTTT TTTTGCATATTAAGCGTTCTCCTATTATATCCTATCTATGCAGATAAAGT TTCAAATCTGTTATCTGTATTGCTGAGGTTCATATTGACCCTTTGCTAGC ACATCAGCGTCCTTTTTACTGTAACTGCTTGTGTTACTTCCATACTTCTT TTAACCTTATCGTTTTTTTTTTGTCCCTTTCTTATTTTCTTTCTTCCACT TCTCTTTTTCTGCCTTGCCCCTTCTCAATCTCTTTTTTTTTTTTTTTATC TACTTGCTTTCTTTGTCTTTTCTTTTTTTTCTTATTCTCCCCCCCCCTTT TTTCCCCCGCTCCCTATCGTTTTCTTTCTTCCTTCTTCATTCTTTATCCT TTCTTTCCTCTTTTTTTATTTATTTTAACCTTTCTTTTCTATTTATCCTT TTCTTTTCTCTTTCTCTTTCTTATATTTTCTTTTCCTCTTTTTATTCTTT CTTTTCTCTACTTACTTTTTTCTTTTCTTTATTTCTATACTTATTTGTAC ACTATCTTCCCCAATACTTCCTCTTCTCTCTTTTTCTATATTTTAACTTT CTATTACTTTTTTTTTTTCTTTATTTTTTTTCATATTTTCTTTTCTTTCT TTTATTATTCTTTTTATCCCTTCTTTTTTACTTCTTTCCTTCTCACTTCT ATCCTACTTACCTCTCTTCTTTTACGTTCCTTCTTCTCTTTTCTTTCTTC TTTTCTCTCCCTCTTCCACTCTCTTTTTTTCTCCTTTCTTCTTTTTTTTT TTTTACTTCCTCCTTCTTCTTTTCCCTACTTCTCTTTTTTTTTTTCTTCC TCCCATTTCACTTCTTTTCTCCTTCTTTTTCTCCTCTATTATTACCTTTT TTTCCTATAATTTTTATTCTTTCTTATATCTTTTTATTTTTATCCCTTCC CTCTTCCTATCTCTTCTTTTTTCCTTTCTTTCTTCTTTTCATTCTTCTCT TACCTTTTTCTCTTCCCCCGTTTTTACCATTTTCTTTTTATTATCACTAT ATTTATCTATTTATCTTTATATTTCTTCTACTCATCTTCTATCTATCATC TTTAATCCTTCTCTATACTTTATTTCTTATATTCTTATTATTCTATTCCT ACTTTTTATTTCACTTTCTATCTACACTCTTCTTTCTTACTACTATTTTA CTTTCTATTCCCGTTATATATTATTTGTCTTCCTCTATTCATTAATTCCA CTTCTTTCTCTCTTTCNTCGCTATTCTTCTCTTGTTCATTCTTTCTTTCT TATCTACATATCGTGTCTGTCTATCATCTCCCTCTA	CTTTAACGACTCTCACTTCCCCCGGGAGCTTTGGGCTTCCCTTTCTCTGA CAGCGCGGGCAGAGCTGGGCTTGGGCGGAGCGCGCCGGAGGATCGTGCGC CGAGCTTCCTTCCCACGGGTCCCCTGCCCGGCCCTTTCTCCGCAAGTCGC TGAGGGTTTGGAACAGTAGCCAAACTAGACAGAGAATTTGGTACTGGGGA ATGGGATCATGGCTACGGGGAGCGTGGGAATTCTCCGCAGCTGCCCAGGT TTCTGTCCTGTAGATACAGGAAGGAGCCGAATCCCAGCATGGGGCATGAG TCCGGACGTCCCGGTTGGGGCTCACACATTGTATAAATCTCGCCTTTGTT TCCCCTTGGTGCGCAGGTGCCCAGAATGCCCGCGCTATTACCCTCCCCCT ATGCCCCCCACACCGCAAAGCTTCCGATGTTCCTTCGGACGTGCTATCCT GGTAAGACCCTATGAGGGGTCGAGTTAAGCCAGGCACCTATTTTGCCCAG TGTTGGCCGTACGCCTGCTGGGTATCTGGTCCTGTTTGTGACGTTATTGT TTCATCTCTATGCTTGCTTGCCCTTATTACCTTGATTTGTTTAGATTCTT TCTCTATTATTGTTTTTCTCCCTTGTTCCCCTCTCTGCTCTTTATTCCTA ATTTTCTCTTGGCTGTTAACCGCTGCCTACTCGCACTTTTTTTTCACCCT ATTATTTTTCCTTCTTGTCTTTCTCACATCTCTCTGCTTTTCTGCTCTCA CTACCTTCCCTCTCTTTCTTTTTCGCCTCCTAATATTCTCTCCTTCATCT TTTTCCTTCATTTCTTTTGTTCTATTTTACTAATCCTTCTTTTTACTTTT CTATCCTTCGATATTCTTTTTCTTTTTTGGATTTACTTCTCTCTTATCTC CTATAAATTCTTTACTTCTTCTCCCTTCCTTTCTTATCTCCTCTTTCTCT CCTCTCTTTTCTTTTTTTACATATTTTTCTTTCCTTCTCTTCTCCTTTCC TTTTCTTTCTTCCTGCTCCCTCCCCATTCTTTTCTTTTACTCCACTCTCT TTCACTCATTCTTCTTCTCTTTCTTTTCATCTCTTTCATCTTTCTTCCTT TTCNACTTATATCTCTCATTCCCTATCCTACTTTTTAATACTCTGTCCTT CTCTTTCTGACTATCCCTCTTCTCACATCTCTATTCACCTCTA
quality values	Open. Hide. 6 6 8 6 8 8 22 17 14 12 10 8 8 8 8 10 8 8 8 9 9 22 23 47 42 47 47 37 36 36 36 36 34 43 40 39 34 36 37 27 26 14 18 15 24 24 37 37 33 37 37 37 21 19 10 10 9 8 10 8 8 8 8 9 8 8 8 10 10 21 41 48 43 41 41 28 28 36 41 59 59 59 59 59 50 48 46 46 46 41 25 27 11 9 9 14 15 12 12 11 10 10 10 8 8 8 8 8 10 9 10 10 13 9 9 12 17 12 11 11 11 10 12 11 14 9 9 9 13 12 23 18 21 24 17 17 20 19 19 10 10 10 10 10 17 18 29 29 35 35 29 31 22 18 20 13 13 10 12 11 8 8 8 9 11 10 10 10 8 8 8 8 8 8 8 8 12 13 13 8 10 19 19 19 17 14 14 15 13 17 15 12 11 11 12 12 14 15 15 19 22 15 12 10 8 8 10 10 12 9 12 8 8 8 8 8 8 8 12 10 15 24 23 18 18 12 12 12 12 11 12 12 12 12 15 12 12 12 19 19 37 30 30 24 16 10 10 9 9 9 9 8 8 6 6 8 8 9 11 11 11 15 19 15 13 11 11 12 9 8 8 8 8 8 9 10 10 10 16 11 10 10 11 11 11 9 8 8 6 6 10 10 8 8 10 9 9 8 8 8 8 8 9 11 12 8 8 8 8 8 8 9 16 19 21 24 13 13 10 10 11 11 12 12 10 9 9 8 8 8 8 8 8 8 8 8 10 8 9 9 8 10 8 8 10 10 8 8 6 6 8 8 8 8 8 8 10 11 11 11 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 9 8 10 10 10 10 10 10 10 10 12 16 15 19 8 8 7 13 8 8 7 7 8 8 11 10 8 8 8 8 10 10 10 11 11 11 10 10 11 11 8 8 8 8 8 8 8 13 10 12 12 8 8 6 6 8 8 10 8 10 7 9 8 8 14 11 11 8 8 10 10 13 15 15 15 8 8 8 8 8 6 6 6 6 8 10 9 9 9 10 11 10 11 11 9 9 8 8 8 8 8 8 6 8 7 7 8 8 10 10 8 8 8 8 6 6 10 8 10 10 10 10 10 10 11 12 12 12 11 11 11 13 17 13 10 10 10 12 10 10 10 9 10 10 10 10 8 10 10 8 8 8 10 8 10 10 12 12 11 11 10 8 8 8 8 8 8 8 6 6 6 9 8 10 10 10 10 8 8 8 11 8 9 10 13 10 11 10 10 10 8 8 8 8 10 10 17 10 10 10 10 10 10 10 10 10 17 16 13 14 17 15 10 8 8 6 6 6 8 8 8 8 8 8 8 8 12 12 11 9 9 9 8 8 7 6 6 6 10 14 18 16 10 10 10 10 10 10 9 10 8 8 8 8 8 10 9 9 10 10 9 9 8 8 8 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 10 10 12 11 11 8 8 6 6 6 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 11 11 11 8 8 8 8 8 10 16 12 8 8 6 6 6 8 8 8 8 10 10 9 9 9 11 13 10 9 9 9 14 11 9 9 12 10 10 10 12 16 17 13 13 11 22 18 15 9 9 9 9 11 8 10 8 8 8 8 8 10 15 14 15 14 10 9 8 8 8 11 8 8 10 8 11 13 15 16 10 10 8 8 8 10 8 8 8 8 8 8 8 6 10 10 8 6 6 8 6 9 8 8 8 8 8 10 11 11 8 8 8 8 10 8 8 6 6 8 6 6 7 7 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 12 8 8 6 6 8 8 8 10 8 8 8 8 8 9 8 8 10 10 15 10 10 10 10 12 8 8 7 6 8 8 12 10 10 9 9 8 8 6 6 6 6 8 8 10 10 11 11 11 8 8 8 8 10 8 15 10 8 8 6 6 8 8 12 10 9 12 8 8 6 6 8 8 10 10 10 10 11 9 9 8 8 8 8 8 8 10 10 10 10 10 10 10 15 11 11 11 11 12 15 12 10 10 10 10 8 8 8 9 12 13 11 14 9 9 9 10 19 23 20 20 13 19 10 8 8 6 6 8 8 10 11 9 11 12 12 11 8 6 6 7 11 9 9 10 10 15 12 8 8 7 6 8 8 9 9 10 16 10 9 8 8 8 8 8 8 6 6 8 8 9 9 9 15 15 18 15 15 12 13 13 10 10 10 10 10 9 9 9 9 10 9 9 9 9 8 8 10 8 12 10 9 8 8 8 8 8 8 8 10 8 8 8 8 9 10 12 12 15 9 9 9 12 9 9 11 11 10 10 8 8 6 7 6 6 8 8 8 8 8 7 9 10 10 16 24 22 22 20 19 19 14 14 15 15 11 12 12 16 16 11 9 9 9 9 10 10 10 10 8 8 8 8 10 8 9 9 10 9 9 9 11 13 13 10 10 8 8 8 8 8 8 8 8 8 8 11 9 9 9 11 9 8 8 6 6 8 8 9 9 11 11 11 13 18 13 10 11 10 10 10 10 9 9 9 9 9 9 9 12 12 12 12 18 11 11 10 10 9 9 9 8 8 8 8 10 6 8 8 6 6 8 8 6 6 6 6 8 8 6 6 8 8 11 10 10 8 8 6 6 8 10 9 11 8 8 8 8 11 10 13 10 11 10 9 9 9 11 16 12 10 8 10 8 8 8 8 8 10 8 9 8 10 9 9 10 12 9 9 9 8 8 9 9 9 10 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 10 10 15 10 12 12 10 10 8 8 8 8 8 15 13 12 9 9 9 9 8 10 7 6 8 8 12 12 8 7 7 10 8 9 9 8 8 6 6 8 6 7 8 8 11 9 8 8 8 8 10 10 13 8 8 8 8 8 8 6 6 6 8 6 9 8 7 8 8 8 8 9 13 9 8 6 7 7 10 8 8 8 12 14 7 7 6 6 6 10 6 8 8 8 10 13 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 9 3 0 3 8 6 6 6 6 6 8 10 10 10 10 11 10 10 7 7 9 10 10 9 9 9 9 12 12 9 9 9 8 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 7 8 8 8 8 6 6 7 6 8 8 6 6 6 10 8 8 8 6 6 8 8 8	Open. Hide. 8 8 8 8 8 8 8 8 13 17 23 21 27 30 37 33 33 53 53 53 53 57 57 57 59 57 57 48 48 48 48 41 50 42 41 39 26 23 13 13 11 11 11 11 11 16 16 12 13 6 6 8 12 17 31 39 39 32 30 18 22 22 28 32 32 39 41 43 28 28 30 37 37 43 35 32 33 39 43 43 43 43 43 43 43 43 43 48 48 47 43 47 43 43 37 43 43 43 43 48 48 48 48 54 57 57 57 44 48 48 57 44 57 43 43 42 44 39 48 48 42 44 46 47 47 47 43 43 38 44 24 26 13 32 32 57 44 48 48 50 50 43 43 43 44 57 52 52 52 52 52 57 52 52 43 43 52 52 57 57 57 57 52 43 43 32 43 27 27 14 19 19 32 32 32 36 23 36 28 32 32 31 31 31 42 43 57 57 57 43 38 38 23 43 43 43 35 35 42 42 57 57 43 43 43 43 44 38 38 38 43 43 50 43 43 36 36 29 29 29 41 38 35 35 32 28 18 18 18 38 38 57 57 50 50 43 42 42 43 43 43 42 43 37 37 37 32 36 37 37 37 37 37 32 25 8 8 8 8 14 14 13 13 14 19 8 10 8 15 15 30 30 30 36 30 25 25 36 25 25 14 14 14 23 20 11 15 15 19 25 31 30 28 28 30 30 33 39 33 32 32 28 32 32 33 28 24 20 20 20 21 28 15 13 13 24 21 10 10 8 11 12 17 15 21 15 16 12 12 11 8 6 6 6 8 8 15 24 34 34 39 37 35 20 22 11 11 10 15 15 31 28 39 43 43 41 34 23 23 24 25 16 14 14 23 17 10 11 10 10 13 19 14 16 16 11 10 10 12 12 13 11 12 11 18 19 22 16 24 37 32 31 25 28 22 29 25 28 29 34 36 31 24 20 20 15 15 19 15 15 14 14 14 18 18 22 18 15 15 15 15 15 15 15 20 31 22 21 13 11 10 10 10 10 16 21 15 19 10 8 8 8 8 8 10 10 10 13 13 16 11 12 12 14 10 13 16 17 14 11 9 9 11 11 11 12 12 12 12 13 12 11 13 11 11 11 12 11 11 11 11 15 12 9 8 8 8 12 13 22 21 16 21 19 19 18 18 13 10 10 9 9 10 9 9 9 9 10 8 8 8 8 8 8 6 6 8 8 12 11 11 11 9 13 8 8 8 8 9 9 12 12 19 11 10 10 10 9 10 8 6 8 8 8 8 8 8 8 8 9 9 11 11 10 8 11 8 8 8 8 9 9 10 12 12 8 8 8 8 8 11 11 12 9 9 9 12 8 8 8 8 8 7 6 8 8 11 8 8 8 8 9 11 10 11 9 9 9 9 9 9 8 8 8 8 8 10 15 10 10 10 10 10 10 10 13 12 9 7 7 9 6 8 8 9 9 9 9 9 9 8 8 10 8 8 8 8 6 6 8 8 10 8 8 8 9 11 11 10 9 10 10 6 6 7 7 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 11 11 8 8 8 8 8 8 10 10 18 9 9 9 12 8 6 6 8 6 8 11 9 10 8 8 8 10 10 9 9 10 10 11 10 10 12 12 12 16 15 19 12 12 8 8 8 8 8 8 9 9 9 9 9 9 10 10 11 11 13 11 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 13 10 10 9 9 6 8 6 6 8 8 8 8 8 8 8 10 10 10 12 10 9 8 8 8 8 8 8 9 9 9 8 10 8 8 6 6 8 6 8 8 8 11 12 11 11 8 10 8 9 10 10 10 10 10 8 8 10 12 12 11 11 11 10 13 10 12 12 10 13 10 12 9 9 9 9 10 12 12 10 6 6 8 8 11 7 6 8 8 9 8 9 9 10 10 12 24 21 15 15 13 14 17 22 23 16 13 10 10 10 9 12 8 8 8 8 10 8 10 10 10 9 9 8 8 8 8 6 6 8 7 6 8 8 8 9 8 8 8 9 9 10 8 8 10 8 8 8 10 10 15 10 10 9 6 6 6 6 8 8 6 6 6 6 8 8 10 10 10 10 8 8 8 10 13 8 8 8 8 8 8 8 12 8 8 10 10 8 8 8 6 7 8 6 9 9 10 8 8 10 12 8 8 8 10 14 16 16 10 10 10 8 8 8 10 10 15 21 22 12 9 9 8 8 8 8 8 8 9 12 12 12 15 10 10 10 6 6 6 7 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 15 21 10 11 9 7 7 6 8 8 8 8 8 8 8 8 8 12 8 8 8 10 9 9 8 8 8 8 8 8 12 11 8 10 7 9 10 10 11 11 8 8 6 6 8 6 8 8 8 9 9 9 10 14 13 15 11 17 12 12 8 10 8 12 12 12 8 8 6 7 7 7 10 3 0 3 8 8 6 6 8 6 9 12 10 13 11 10 6 6 6 6 8 8 8 8 8 12 10 8 6 6 6 10 10 11 7 7 9 8 10 10 8 8 8 6 6 10 10 10 10 10 12 11 12 8 8 8 8 8 8 8 6 7 12 19 12 10 10 8 8 8 12 13 10 10 10 10 8 11 11 10 10 7 7 8 8 6 6 7 6 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no093_i02.g1 MSMg01no093_i02.g1 CHROMAT_FILE:
MSMg01no093_i02.g1 PHD_FILE: MSMg01no093_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:48:13 2005
         (208 letters)



>mm_chr15_11833586_11834193
          Length = 608

 Score =  389 bits (201), Expect = e-113
 Identities = 204/205 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcgcgggcagagctgggcttgggcggagcgcgccggaggatcgtgcgccgagcttccttc 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcgcgcgcagagctgggcttgggcggagcgcgccggaggatcgtgcgccgagcttccttc 346

                                                                       
Query: 61  ccacgggtcccctgcccggccctttctccgcaagtcgctgagggtttggaacagtagcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccacgggtcccctgcccggccctttctccgcaagtcgctgagggtttggaacagtagcca 286

                                                                       
Query: 121 aactagacagagaatttggtactggggaatgggatcatggctacggggagcgtgggaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aactagacagagaatttggtactggggaatgggatcatggctacggggagcgtgggaatt 226

                                    
Query: 181 ctccgcagctgcccaggtttctgtc 205
           |||||||||||||||||||||||||
Sbjct: 225 ctccgcagctgcccaggtttctgtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space:   119201
Effective search space used:   119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information