Query= MSMg01no096_g13.b1 MSMg01no096_g13.b1 CHROMAT_FILE:
MSMg01no096_g13.b1 PHD_FILE: MSMg01no096_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:45 2005
(592 letters)
>mm_chr15_62692752_62693743
Length = 992
Score = 1114 bits (576), Expect = 0.0
Identities = 588/592 (99%)
Strand = Plus / Minus
Query: 1 caaactggaatctaagtcatacaggccttaggagctcatctttaacaaatagcttggagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 792 caaactggaatctaagtcatacaggccttaggagctcatctttaacaaatagtttggagt 733
Query: 61 aaaatgtcagcaaaaaataatgatcatttttttatgtttcgtctgagtgtataattttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aaaatgtcagcaaaaaataatgatcatttttttatgtttcgtctgagtgtataattttat 673
Query: 121 gatagtaaattttgacctaagtggtactcaagtgaaagccttaggccatgggtggagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gatagtaaattttgacctaagtggtactcaagtgaaagccttaggccatgggtggagttg 613
Query: 181 tggggagggtcaatctatctgaaggagtccttaaatactttcttttgaaagaaaacccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tggggagggtcaatctatctgaaggagtccttaaatactttcttttgaaagaaaacccag 553
Query: 241 tgtttcattgcctgtaaggcagcaagtgaccttccagccaaaaagtggaaagaaacaatc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtttcattgcctggaaggcagcaagtgaccttccagccaaaaagtggaaagaaacaatc 493
Query: 301 caacacccaccctcctcaatgaagtctgctctgaacaatcctacaaccaaagtctgtccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 caacacccaccctcctcaatgaagtctgctctgaacaatcctacaaccaaagtctgtccc 433
Query: 361 tgttatgactgccagcagctgtgctcatgcatttctggaagtaaatgttggccatgaagt 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgttatgactgccagcagctgtgttcatgcatttctggaagtaaatgttggccatgaagt 373
Query: 421 cagggatgttattcacagaggaaattatatcagccaaatttaggaaagtttaaagctcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagggatgttattcacagaggaaattatatcagccaaatttaggaaagtttaaagctcat 313
Query: 481 gacatttcctgttcttttagggaaagcttgtatatgttagaatatttttaagaatcaagg 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 312 gacatttcctgttcttttagggaaagcttgtgtatgttagaatatttttaagaatcaagg 253
Query: 541 atcacttttgtttcaaaataatgtctgttctttgcctctatttaacttctga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atcacttttgtttcaaaataatgtctgttctttgcctctatttaacttctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_g13.g1 MSMg01no096_g13.g1 CHROMAT_FILE:
MSMg01no096_g13.g1 PHD_FILE: MSMg01no096_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:45 2005
(288 letters)
>mm_chr15_62582641_62583327
Length = 687
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 aaagaaaaacaccagggcaggcaggctgttaatctgggcatcagcctagaggaggaagat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 487 aaagaaaaacaccagggcaggcaggctgttaatctgggcatcagcctacaggaggaagat 428
Query: 61 ggatgtgaggaagaggaaagccattgctgtttgtgctaaatcagtgtcgaggtcagccac 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggatgtgaggaagaggaaagcca-tgctgtttgtgctaaatcagtgtcgaggtcagccac 369
Query: 121 atagcaggaagaagaactttaaagaaagaaaaaggtagctaaaacaaaactagagaaagt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 atagcaggaagaagaactttaaagaaagaaaaaagtagctaaaacaaaactagagaaagt 309
Query: 181 atccttaggctcttaccagcatctgaaaaatagactagaagaaaagaggaaccataaaac 240
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 308 atacttaggctcttaccagcatctgaaaaatagactagaagaaaagaagaaccataaaac 249
Query: 241 ctttcagattctggactcaaaaatatgaactggcctttaaaaaacatc 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctttcagattctggactcaaaaatatgaactggcctttaaaaaacatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
