Query= MSMg01no098_j21.b1 MSMg01no098_j21.b1 CHROMAT_FILE:
MSMg01no098_j21.b1 PHD_FILE: MSMg01no098_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:47 2005
(410 letters)
>mm_chr15_67916942_67917751
Length = 810
Score = 671 bits (347), Expect = 0.0
Identities = 377/387 (97%)
Strand = Plus / Plus
Query: 24 aagctattctgagagaaaactgctaacttatctagccatttctgtatgtataaaccaaga 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aagctattctgagagaaaactgctaacttatctagccatttctgtatgtataaaccaaga 283
Query: 84 caaaccaagacatttatttccttttactatttatttccatttcatttatctgcaaaaatg 143
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 caacccaagacatttatttccttttactatttatttccatttcatttatctgcaaaaatg 343
Query: 144 caccaaaaccaaggctgtggaggtaaatattaatttctttctttgaaagacagtacctaa 203
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 344 caccaaaaccaaggctgtggaggtaaatattaatttctttcgttgaaagacagtacctaa 403
Query: 204 cgggagaataggatgctgcaaacctcctccctcgcctggtagcaaactatgcggaggaag 263
||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 404 cgggagaataggatgctgcaaacctcctccctcacctgatagcaaactatgaggaggaag 463
Query: 264 gaaggagggtgggtgataaacattgaggtcctcaggaaacatgtccacaaactacactgc 323
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 464 gaaggagggtgggtgataaacattgaggtcctcaggaaacatgtccacaaactacagtgc 523
Query: 324 acgccaggtaagtgtggtggtaccatgtggtgagcagaaggagagagccacaatgagctc 383
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atgccaggtaagtgtggtggtaccatgtggtgagcagaaggagagagccacaatgagctc 583
Query: 384 atgtgatacacatggctgtactcagta 410
|||||||| || ||||||||||||||
Sbjct: 584 atgtgatatacccggctgtactcagta 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_j21.g1 MSMg01no098_j21.g1 CHROMAT_FILE:
MSMg01no098_j21.g1 PHD_FILE: MSMg01no098_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:47 2005
(353 letters)
>mm_chr15_68058614_68059366
Length = 753
Score = 565 bits (292), Expect = e-165
Identities = 302/306 (98%), Gaps = 2/306 (0%)
Strand = Plus / Minus
Query: 1 tttctcctctttatgtcttcttacctaatattgtgctaggaataattagttttgttatga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 306 tttctcctctttatgtcttcttacctaatattgtgttaggaataattagttttgttatga 247
Query: 61 acagtgacaatgtttagataggaattaagtggcagagagcaacatattctacccgctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acagtgacaatgtttagataggaattaagtggcagagagcaacatattctacccgctgct 187
Query: 121 ggatgaggcctctcagaggacagttatgctaggctcctgtctgcaagcaaagcagagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggatgaggcctctcagaggacagttatgctaggctcctgtctgcaagcaaagcagagtat 127
Query: 181 cattcatagtcaggggttaa--ctctctcatggagcgagtctcacgtttggctagcattg 238
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cattcatagtcaggggttaactctctctcatggagcgagtctcacgtttggctagcattg 67
Query: 239 gccggtcattccctcagtctctgctctgtctttatccctggcaggtcaagttttgtgttg 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gccggccattccctcagtctctgctctgtctttatccctggcaggtcaagttttgtgttg 7
Query: 299 aaggtt 304
||||||
Sbjct: 6 aaggtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
