Query= MSMg01no098_n14.b1 MSMg01no098_n14.b1 CHROMAT_FILE:
MSMg01no098_n14.b1 PHD_FILE: MSMg01no098_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:05 2005
(493 letters)
>mm_chr15_61662138_61663029
Length = 892
Score = 893 bits (462), Expect = 0.0
Identities = 483/490 (98%), Gaps = 4/490 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttttctgttgtttgtttg-tttttaaaaaaatttttattagatattttcttc 63
|||||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 790 gaattctttttt-t-ttgtttgtttgttttttaaaaaattttttattagatattttcttc 733
Query: 64 atttacatttcaaatgctaaaagtcccaaaagtcccctataccctccctctgccctgctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atttacatttcaaatgctaaaagtcccaaaagtcccctataccctccctctgccctgctc 673
Query: 124 ccctacctacccactcccacttcttggccctggcgttcccctgtaggcagctaaaaatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccctacctacccactcccacttcttggccctggcgttcccctgtaggcagctaaaaatag 613
Query: 184 ggtagcagcctcctgggaaggctacatagagagcttacgaagaggtaagcatttctcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggtagcagcctcctgggaaggctacatagagagcttacgaagaggtaagcatttctcttg 553
Query: 244 atgatatctatattactaataactatactgtccaaatattcatcttcttcagtagcgatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 552 atgatatctatattactaataactatactgtccaaatattcatcttcttcagtagtgatt 493
Query: 304 tgagagcaaatactatctcatgcttcctttagacaaatactatagtctgtacgaaaagag 363
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 492 tgagagcaaatactgtctcatgcttcctttagacaaatactatagtctgta-gaaaagag 434
Query: 364 gtgaaattacctggggcctgtgtgattgagcagaacttcattttaaaagagtgagcattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtgaaattacctggggcctgtgtgattgagcagaacttcattttaaaagagtgagcattt 374
Query: 424 aggggaatatttagtataaatatttaatatttataaattgatatattttcagttgattca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggggaatatttagtataaatatttaatatttataaattgatatattttcagttgattca 314
Query: 484 tttttgagta 493
||||||||||
Sbjct: 313 tttttgagta 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 892
Length adjustment: 10
Effective length of query: 483
Effective length of database: 882
Effective search space: 426006
Effective search space used: 426006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_n14.g1 MSMg01no098_n14.g1 CHROMAT_FILE:
MSMg01no098_n14.g1 PHD_FILE: MSMg01no098_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:05 2005
(298 letters)
>mm_chr15_61551257_61551955
Length = 699
Score = 549 bits (284), Expect = e-161
Identities = 293/296 (98%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttggaatttttaaatgaacaag-ataagaaaatattcaaaattctttttgaac 62
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttggaatttttaaatgaacaagtataagaaaatattcaaaattctttttgaac 263
Query: 63 atgagaaaactgagatttctggaggtcaaccgtcccattaggggtgacacagttagcaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgagaaaactgagatttctggaggtcaaccgtcccattaggggtgacacagttagcaac 323
Query: 123 agatgataaggaaggattaggcatggaagcaaaactgacaagccatacacaagaaagatt 182
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 agatgataaggaaagattaggcatggaagcaaaactgacaagtcatacacaagaaagatt 383
Query: 183 aacagaaggcgatagttgggactaatgaaaagaacaattggaaaaagtagtaaacccacg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacagaaggcgatagttgggactaatgaaaagaacaattggaaaaagtagtaaacccacg 443
Query: 243 aaagttttcaaaagaacactgaagatgcacagggttttggaattgccacaggagac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagttttcaaaagaacactgaagatgcacagggttttggaattgccacaggagac 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 699
Length adjustment: 9
Effective length of query: 289
Effective length of database: 690
Effective search space: 199410
Effective search space used: 199410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
