Query= MSMg01no098_n15.b1 MSMg01no098_n15.b1 CHROMAT_FILE:
MSMg01no098_n15.b1 PHD_FILE: MSMg01no098_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:05 2005
(377 letters)
>mm_chr15_60264189_60264966
Length = 778
Score = 708 bits (366), Expect = 0.0
Identities = 372/374 (99%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtacagcttcatatccaatctagcctatccttttctc-aagttaccttgtact 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 578 gaattctgtacagcttcatatccaatctagcctatccttttctcaaagttaccttgtact 519
Query: 64 tgacatattattttcctggaatttggatataaagccaaaatataagagaaaggatcatgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgacatattattttcctggaatttggatataaagccaaaatataagagaaaggatcatgg 459
Query: 124 caggaacacttggcctaggaagatcaccagacatgaaggatagaaatatgtggcatagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caggaacacttggcctaggaagatcaccagacatgaaggatagaaatatgtggcatagaa 399
Query: 184 gtaactgtcatacatttcagattttggttcatggacagagattttaatttttcaggggtt 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtaactgtcatacattgcagattttggttcatggacagagattttaatttttcaggggtt 339
Query: 244 tctatatcctagtcacagaatgtaaataaaataattacaaatgcactttcctagttcact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctatatcctagtcacagaatgtaaataaaataattacaaatgcactttcctagttcact 279
Query: 304 ttgcccttttgacatctaatcagagatgaacaccgtatcagacaatgccataaaaggatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttgcccttttgacatctaatcagagatgaacaccgtatcagacaatgccataaaaggatg 219
Query: 364 atatttgtcgtcag 377
||||||||||||||
Sbjct: 218 atatttgtcgtcag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 778
Length adjustment: 9
Effective length of query: 368
Effective length of database: 769
Effective search space: 282992
Effective search space used: 282992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_n15.g1 MSMg01no098_n15.g1 CHROMAT_FILE:
MSMg01no098_n15.g1 PHD_FILE: MSMg01no098_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:05 2005
(590 letters)
>mm_chr15_60129213_60130203
Length = 991
Score = 1089 bits (563), Expect = 0.0
Identities = 584/591 (98%), Gaps = 1/591 (0%)
Strand = Plus / Plus
Query: 1 cctatttgatc-taacaattgtgttgagagtaagagctttatggcatattgtatttttta 59
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 201 cctatttgatcataacaattgtgttgagagtaagagctttacggcatattgtatttttaa 260
Query: 60 aaatagtttagaaatatgattctatgctgtacttcttctattccatgagctaggtaggaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatagtttagaaatatgattctatgctgtacttcttctattccatgagctaggtaggaa 320
Query: 120 ccaactgctaaacatttgaaggaagtaaagctgactggtgtttctcttgcctggagaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaactgctaaacatttgaaggaagtaaagctgactggtgtttctcttgcctggagaaac 380
Query: 180 acaaacagtcaatacggatacaaactaatttttcttttccaccatgcctgcagggattaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaacagtcaatacggatacaaactaatttttcttttccaccatgcctgcagggattaa 440
Query: 240 ctttggaaacagtgatgatgataatctggttctagtttctcagttttggggaatttattt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttggaaacagtgatgatgataatctggttctagtttctcagttttggggaatttattt 500
Query: 300 ttgtaattgagagtgtgaaccatgtactggatatcataacatgctttctggggtaaaact 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ttgtaattgagagtgtgaaccatgtactggatatcataacatgctttctgaggtaaaact 560
Query: 360 ttaataaaattaatctatgtgttttgactttatttctacagggatggagtttcatattat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 ttaataaaattaatctatgtgttttgactttatttctacagggatggagtttcatatgat 620
Query: 420 cttgtctattataattttaaggtctacttttagtctctatgtatacagccatgttttctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgtctattataattttaaggtctacttttagtctctatgtatacagccatgttttctt 680
Query: 480 tctttatcttttaggatcctatatggatctccatgtcgtctatgttctatttttccttat 539
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 681 tctttatcttttaggatcctatatggatctccatggcttctatgttctatttttccttat 740
Query: 540 tagagaacaagtaacatgttaaggaaattctcaccagagagaaggttcaga 590
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagagaacaagtaacatgttaaggaaattctcaccagagagaaggttcaga 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 991
Length adjustment: 10
Effective length of query: 580
Effective length of database: 981
Effective search space: 568980
Effective search space used: 568980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
