Query= MSMg01no100_l07.b1 MSMg01no100_l07.b1 CHROMAT_FILE:
MSMg01no100_l07.b1 PHD_FILE: MSMg01no100_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:40 2005
(164 letters)
>mm_chr15_84373579_84374142
Length = 564
Score = 302 bits (156), Expect = 9e-87
Identities = 162/164 (98%)
Strand = Plus / Minus
Query: 1 atgctggcatgttccttatttctggtgagcagcaagtggactatggaaagaatttgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atgctggcatgttccttatttctggtgagcagcaagtggactatggaaagaatttgtgtg 305
Query: 61 tgatgatgcccagtcccagggaacatacctagactttgaggatggttaacagttgccatg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 304 tgatgatgcccagtcccagggaacatacctagactttgaggatggctaacagttgccatg 245
Query: 121 ctaacccagtctttatgacagtccctctacccctgtcagctgaa 164
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 244 ctaacccagtctttatgacagtccctctacacctgtcagctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no100_l07.g1 MSMg01no100_l07.g1 CHROMAT_FILE:
MSMg01no100_l07.g1 PHD_FILE: MSMg01no100_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:40 2005
(280 letters)
>mm_chr15_84232169_84232848
Length = 680
Score = 441 bits (228), Expect = e-128
Identities = 266/282 (94%), Gaps = 8/282 (2%)
Strand = Plus / Plus
Query: 1 aattctgctgtcattctccctgggcctcggtttcttggattggcctgagggcactcactg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctgctgtcattctccctggacctcggtttcttggattggcctgagggcactcactg 260
Query: 61 tggggctgctggagagagtcagcaaccctgtccaccggagccatgaagctctgctgcctc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tggggctgctggagagagtcagcaaccctgtccatcggagccatgaagctctgctgcctc 320
Query: 121 actcagcctgctgtgcactctgtg--gttcattcactgagctgaccttccctggggggag 178
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 a----gcctgctgtgcactctgtgtggttcattcactgagctgaccttccctggggggag 376
Query: 179 ggggagcttcaataccccaccccc--acccccgagacacaggccatccactcagagtgtg 236
||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 377 ggggagcttcaataccctacccccccacccccaagacacaggccatccactcagagtgtg 436
Query: 237 cctaccacgatttatttgtttgttctcagtgccggagctctg 278
|||||||||| || ||||||||||||||||||||||||||
Sbjct: 437 cctaccacgagctaggtgtttgttctcagtgccggagctctg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
