Query= MSMg01no101_e21.b1 MSMg01no101_e21.b1 CHROMAT_FILE:
MSMg01no101_e21.b1 PHD_FILE: MSMg01no101_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:28 2005
(233 letters)
>mm_chr15_8772758_8773389
Length = 632
Score = 420 bits (217), Expect = e-122
Identities = 223/225 (99%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 2 atatttttgtccaccgatgtctgatgcctttttaaacacagagctttaaaagctcatcca 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atatttttgtccaccaatgtctgatgcctttttaaacacagagctttaaaagctcatcca 366
Query: 62 tttttgtcctctattatagtgtgaaaagcatctgtcccaccacctataccctaagtaaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttttgtcctctattatagtgtgaaaagcatctgtcccaccacctataccctaagtaaaa 306
Query: 122 gggtcacaacataaaagtaaattctgtcctcctcagctaggatcatgtactggaaacacg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggtcacaacataaaagtaaattctgtcctcctcagctaggatcatgtactggaaacacg 246
Query: 182 gccacttgttactacatggttctctagtgactttgtgtgggtgtc 226
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 245 gccacttgttactacatggttct-tagtgactttgtgtgggtgtc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no101_e21.g1 MSMg01no101_e21.g1 CHROMAT_FILE:
MSMg01no101_e21.g1 PHD_FILE: MSMg01no101_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:28 2005
(370 letters)
>mm_chr15_8594690_8595459
Length = 770
Score = 685 bits (354), Expect = 0.0
Identities = 367/374 (98%), Gaps = 6/374 (1%)
Strand = Plus / Plus
Query: 1 ttctcccccgctctcccctttggatttagtcttttcttttgtctcctgctctgaatctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcccccgctctcccctttggatttagtcttttcttttgtctcctgctctgaatctta 260
Query: 61 ttaagagaagtttggtcataagttgtgacttagcaagtccatgatacttcctctgcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagagaagtttggtcataagttgtgacttagcaagtccatgatacttcctctgcatct 320
Query: 121 gctggatgctgccagaactctgccacagacactttcttggggttgaaacagaagggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctggatgctgccagaactctgccacagacactttcttggggttgaaacagaagggagaa 380
Query: 181 ctcagcccctactcccaccccgatgatctggggcctgtgtttgctttttctcctactggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagcccctactcccaccccgatgatctggggcctgtgtttgctttttctcctactggg 440
Query: 241 aatgttttttttgtatgacaggatgtgcccagtcattctgacctgagcagaaagtcacct 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgttctttttgtatgacaggatgtgcccagtcattctgacctgagcagaaagtcacct 500
Query: 301 caatcctttctgtaccatccaaggcagatgg---t---tctctctctctctctctctctc 354
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 501 caatcctttctgtaccatccaaggcagatggcgctcgctctctctctctctctctctctc 560
Query: 355 tctctctctctctc 368
||||||||||||||
Sbjct: 561 tctctctctctctc 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
