Query= MSMg01no102_d15.b1 MSMg01no102_d15.b1 CHROMAT_FILE:
MSMg01no102_d15.b1 PHD_FILE: MSMg01no102_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:45 2005
(468 letters)
>mm_chr15_29589057_29589923
Length = 867
Score = 748 bits (387), Expect = 0.0
Identities = 411/419 (98%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 1 tcacttattcttcttaaaagtgaaacccagtgaaaagaatattcagggtgtttgaatcaa 60
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 608 tcacttattcttattaaaagtgaaacccagtgaaaagaatattca-ggtgtttgaatcaa 550
Query: 61 tatccttccatggaaggtacttgagtgttgaaaagaactttcaaaaacagttggcatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tatccttccatggaaggtacttgagtgttgaaaagaactttcaaaaacagttggcatctt 490
Query: 121 agaagagtcaactaatccaaacacaataagaccatacttcaccctaattggatgcctaac 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agaggagtcaactaatccaaacacaataagaccatacttcaccctaattggatgcctaac 430
Query: 181 tatcaacaagaagagctgagatccgttctctacagcgtttgcaatgtgaaatggtgctca 240
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 429 tatcaacaagaagagctgagatcctttctctatagcgtttgcaatgtgaaatggtgctca 370
Query: 241 gttgtacaaacgtggctcgatagagttgtgacatgatcctgaattacattacacatcaag 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 369 gttgtacaaacgtggctcgatagagttgtgacacgatcctgaattacattacacatcaag 310
Query: 301 ttctgtgcacaacagtttgtgattgaacatttatgctttgtgaaaattattcctgtactc 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttctgtgcacaacggtttgtgattgaacatttatgctttgtgaaaattattcctgtactc 250
Query: 361 ttatcatgggctttttaaaaaaatcaaagcccaaggtacaaatatctcacatatatata 419
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 249 ttatcatgggctttttaaaaaaatcaaagcccaaggtacaaatatctcaaatatatata 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_d15.g1 MSMg01no102_d15.g1 CHROMAT_FILE:
MSMg01no102_d15.g1 PHD_FILE: MSMg01no102_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:45 2005
(240 letters)
>mm_chr15_29413541_29414180
Length = 640
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 catgttgtgattggaaagcattatgagactagtaaagaaactgccctctttaaaagagtt 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 catgttgtgattggaaagcattatgagactagtaaagaaactgcagtctttaaaagagtt 260
Query: 61 agtagaatctatttatactttattatgttgctccaagtaagattctctgtcagactattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtagaatctatttatactttattatgttgctccaagtaagattctctgtcagactattt 320
Query: 121 ccactacttatcataaattattcataataaaatattaatagaaaataaataaaatgatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccactacttatcataaattattcataataaaatattaatagaaaataaataaaatgatgg 380
Query: 181 ttggtcttaatatagcagaaaacatcaatatatttaaaacatacacacatacacacacac 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ttggtcttaatatagcagaaaacatcaatatatttaaaacatacacacacacacacacac 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
