Query= MSMg01no102_i13.b1 MSMg01no102_i13.b1 CHROMAT_FILE:
MSMg01no102_i13.b1 PHD_FILE: MSMg01no102_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:09 2005
(244 letters)
>mm_chr15_63935918_63936561
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 caccttccctcaacacttggtcaattcttgtatgtctaaagaatatccgcctggctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccttccctcaacacttggtcaattcttgtatgtctaaagaatatccgcctggctgact 260
Query: 61 tcattccctaccctcttctgggaagaaactaaggggcagatttgggagccgtacaagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattccctaccctcttctgggaagaaactaaggggcagatttgggagccgtacaagtcc 320
Query: 121 agttttgaatttctggtggaccactgatctggactgagcttgaaggatgttgctctttct 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 agttttgaatttctggtggaccactgatctggactgagcttggaggatgttgctctttct 380
Query: 181 gctgaaagatggagctctccttacccacacaataggagtaacagctgtgcccactgcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgaaagatggagctctccttacccacacaataggagtaacagctgtgcccactgcaac 440
Query: 241 agag 244
||||
Sbjct: 441 agag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_i13.g1 MSMg01no102_i13.g1 CHROMAT_FILE:
MSMg01no102_i13.g1 PHD_FILE: MSMg01no102_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:09 2005
(241 letters)
>mm_chr15_64042358_64042998
Length = 641
Score = 427 bits (221), Expect = e-124
Identities = 236/241 (97%), Gaps = 2/241 (0%)
Strand = Plus / Minus
Query: 1 ataaaactgaattctagttgtcagaaatgataagtattttcagacttgttccggtgttta 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataaaactgaattctagttgttagaaatgataagtattttcagacttgttccggtgttta 381
Query: 61 tcttgtggctactccatttattctctctgtggaaggacgggacagatctacttctggcat 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 tcttgtggctactccatttattctctctgtggaaggacggggcagatctacttctggcat 321
Query: 121 gatcgctcccaaggtcaacttgaattctctcaaacttccaagagtagttgtcttagttga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatcgctcccaaggtcaacttgaattctctcaaacttccaagagtagttgtcttagttga 261
Query: 181 caaactactgtgaccaagagcag-ctcgctgggagaaggaagggtttggcccatttccac 239
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 260 caaactactgtgaccaagagcagcct-gctgggagaaggaagggtttggcccatttccac 202
Query: 240 c 240
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
