Query= MSMg01no104_a21.b1 MSMg01no104_a21.b1 CHROMAT_FILE:
MSMg01no104_a21.b1 PHD_FILE: MSMg01no104_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:10 2005
(387 letters)
>mm_chr15_45377439_45378225
Length = 787
Score = 702 bits (363), Expect = 0.0
Identities = 381/387 (98%)
Strand = Plus / Plus
Query: 1 aagtccaaataagacttcgcatgtctgatacctgggtttttctaagatggcctatgtctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aagtccaaataagacttcgcatgtctgatacctgggtttttctaagatggtctatgtctc 260
Query: 61 ttagaagaagataccatcccagatgaaataatttctttgaaagaaatgtaaatataacaa 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagaagaagatactatcccagatgaaataatttctttgaaagaaatgtaaatataacaa 320
Query: 121 acattaaaatattcactatttaaaaataccttcagagtttttatccacctccttctctcc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattaaaatattcactatataaaaataccttcagagtttttatccacctccttctctcc 380
Query: 181 ccctgtttattatcttcactgaccagtctgcaattaaaaatctcgtcaacagatgtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgtttattatcttcactgaccagtctgcaattaaaaatctcgtcaacagatgtttcc 440
Query: 241 catttctctcattataatacttttaactttctaaagatttaacatcgtcactttttactc 300
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 catttctcccattataatacttttaactttctaaaaatttaacatcgtcactttttactc 500
Query: 301 ttttgtttctgaagatattccaggttacatgcacctatgtttatgattcaatatgtttgc 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ttttgtttctgaagatattccaggttacacgcacctatgtttatgattcaatatgtttgc 560
Query: 361 gttatgcttattataaatagatacaag 387
|||||||||||||||||||||||||||
Sbjct: 561 gttatgcttattataaatagatacaag 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_a21.g1 MSMg01no104_a21.g1 CHROMAT_FILE:
MSMg01no104_a21.g1 PHD_FILE: MSMg01no104_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:10 2005
(608 letters)
>mm_chr15_45538636_45539643
Length = 1008
Score = 775 bits (401), Expect = 0.0
Identities = 419/425 (98%), Gaps = 2/425 (0%)
Strand = Plus / Minus
Query: 1 actttggtttatgtatattgctatctcacggtctcatttaagttaatagcatcaaataat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 427 actttggtttatgtatattgctatctcacggtctcatttaagttaataacatcaaataat 368
Query: 61 attaatatcttaagacacttcca-ttttgtaaatctgaacttgtgtttaagtccctgagt 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 367 attaatatcttaagacacttccatttttgtaaatctgaacttgtgtttaagtccctgagt 308
Query: 120 tattgttttaaggtatataatattaggtgataaaaaatgtttagaattgatgacatgtgt 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 307 tattgttttaaggtatataatattaggtgat-aaaaatgtttagaattgatgacatgtgt 249
Query: 180 tttatatggcaagaatatttcatattttagagagattaaaatctttactgttgggagcta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttatatggcaagaatatttcatattttagagagattaaaatctttactgttgggagcta 189
Query: 240 ttaagacaactctattgtcttgatctctgaattgggcctctccccccaagaagaaagggg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 188 ttaagacaactctattgtcttgatctctgaattgggcctctccccccaagaagaaaaggg 129
Query: 300 ggtcaaaagcgggccaccgacgcaccattccaagaacaaccacaatatgttctggcccta 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggtcaaaagcgggccactgacgcaccattccaagaacaaccacaatatgttctggcccta 69
Query: 360 agtcagcgccagatgtcctgaccataagatgtaccctgatatcaccaagttcctgcttcc 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 68 agtcagcgccagatgtcctgaccacaagatgtaccctgatatcaccaagttcctgcttcc 9
Query: 420 acgtg 424
|||||
Sbjct: 8 acgtg 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
