Query= MSMg01no105_b08.b1 MSMg01no105_b08.b1 CHROMAT_FILE:
MSMg01no105_b08.b1 PHD_FILE: MSMg01no105_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:35 2005
(349 letters)
>mm_chr15_100820183_100820933
Length = 751
Score = 514 bits (266), Expect = e-150
Identities = 325/352 (92%), Gaps = 16/352 (4%)
Strand = Plus / Plus
Query: 4 ggaattcatctgt---gtcccagagcaaggttttacgtgccgtggatgaagctttgaaca 60
||||||||||||| || ||||||||||||||||||||||||| |||||||| ||||
Sbjct: 204 ggaattcatctgtgaagt---agagcaaggttttacgtgccgtggacgaagctttaaaca 260
Query: 61 agctaagtgaagctgcgttgcaaaggccacataccacatgattctgtttaatgaaaagcg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctaagtgaagctgcgttacaaaggccacataccacatgattctgtttaatgaaaagcg 320
Query: 121 gctaatctgtcgagacggaaatcagattattgattggccgaatctagcagagagtgtaat 180
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 gcaaatctgtcgagacggaaatcagattattgattggccgagtctagcagagagtgtaat 380
Query: 181 taggagtgactcctgaccgatccagccattagagagtggtgatagatagttgagttgtac 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 taggagtgactcctgaccgatccagccgttagagagtggtgatagatagttgagttgtac 440
Query: 241 agaactatccatattcta---aagacctgaagtaagtcactcattttagaatggtttgaa 297
|||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ggaactatcaatattctatctatgac-tgaagtaagtcactcattttagaatggtttgaa 499
Query: 298 atgataatttgttgtgtgtatttcg------ttttttttattggaaaagaag 343
|||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 500 atgataatttgttgcgtgtatttccatttcattttttttattggaaaagaag 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 751
Length adjustment: 9
Effective length of query: 340
Effective length of database: 742
Effective search space: 252280
Effective search space used: 252280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_b08.g1 MSMg01no105_b08.g1 CHROMAT_FILE:
MSMg01no105_b08.g1 PHD_FILE: MSMg01no105_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:35 2005
(252 letters)
>mm_chr15_100988595_100989245
Length = 651
Score = 449 bits (232), Expect = e-131
Identities = 247/254 (97%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 1 agtgcccacagggagagaactgtccccgtaaggttcaggccctcgacaaaggcttgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agtgcccacagggagagaactgtccccgtaaggttcaggccctcgacaaaggcttgtggg 541
Query: 61 aaagtttctggtaggagccggcatggagttcagtggcagaactcatgcttagcatccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaagtttctggtaggagccggcatggagttcagtggcagaactcatgcttagcatccaca 481
Query: 121 tagacccagggtgcaacctcaagaacatcctcagcgaagagtaatgacaggaaggtatgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 -agacccagggtgcaacctcaagaacatcctcagcgaagagtaatgacaggaaggtatgt 422
Query: 181 ctatgccatataatta--tttgttggggaaaacaggttataagatatgtatggtataatc 238
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 ctatgccatataattagg---gttggggaaaacaggttataaaatatgtatggtataatc 365
Query: 239 taaaattatacata 252
||||||||||||||
Sbjct: 364 taaaattatacata 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 651
Length adjustment: 9
Effective length of query: 243
Effective length of database: 642
Effective search space: 156006
Effective search space used: 156006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
