Query= MSMg01no105_p01.b1 MSMg01no105_p01.b1 CHROMAT_FILE:
MSMg01no105_p01.b1 PHD_FILE: MSMg01no105_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:44 2005
(405 letters)
>mm_chr15_64005683_64006488
Length = 806
Score = 694 bits (359), Expect = 0.0
Identities = 392/403 (97%), Gaps = 1/403 (0%)
Strand = Plus / Minus
Query: 1 attgccttggcagggatcctacgccctctggtgg-atatactggaaaaccttcctcagat 59
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 603 attgccttggcagggatcctacgccctctggtggtatatactagaaaaccttcctcagat 544
Query: 60 gttaagccagtggaagtttagcaaagagcatgacagagctgctgagaaaacccaaggtgt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gttaagccagtggaagtttagcaaagagcatgacagagctgctgagaaaacccaaggtgc 484
Query: 120 gagtaacagggacgcactgggagaaggcagaagccaaaaggcatgacttctcttctcttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gagtaacagggacgcactgggagaaggcagaagccaaaaggcatgacttctcttctcttc 424
Query: 180 ccctttgctccctcagttctggattcataactggcattttaaaaatacgtgggttttcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccctttgctccctcagttctggattcataactggcattttaaaaatacgtgggttttcag 364
Query: 240 cactcacgagagtttgtaagctggcacagaacgtgtgtgttggctcgttccatcctcacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cactcacgagagtttgtaagctggcacagaacgtgtgtgttggctcgttccatcctcacc 304
Query: 300 tggttgctggcaggagcatgcagcccctccaggctgccagcaccaggccatcgagcagca 359
|| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||
Sbjct: 303 tgcttgctggcaggagcatgcagcccctccactctgtcagcaccaggccattgagcaaca 244
Query: 360 gtggatgtcctcatgtcatcctctcttgctggctgtcggctgc 402
||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 243 gtggatgtcctcatgtcattctctcttgctggctgtcgactgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 806
Length adjustment: 9
Effective length of query: 396
Effective length of database: 797
Effective search space: 315612
Effective search space used: 315612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_p01.g1 MSMg01no105_p01.g1 CHROMAT_FILE:
MSMg01no105_p01.g1 PHD_FILE: MSMg01no105_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:44 2005
(377 letters)
>mm_chr15_63846644_63847420
Length = 777
Score = 704 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Plus
Query: 6 aattgatttttctaataaaaattaaagtaaggtgagaacaaggtgtctatccagcaccta 65
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattgacttttctaataaaaattaaagtaaggtgagaacaaggtgtctatccagcaccta 265
Query: 66 ggacagagagtaggatccctgtcctgtcaatgccctgaatacacctagaaacagctaccg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggacagagagtaggatccctgtcctgtcaatgccctgaatacacctagaaacagctaccg 325
Query: 126 catgtctttctcctgtctcttgttaaatatttcagtactttaatggctagacttcaaagc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 catgtctttctcctgtctcttgttaaatatttcagtactttaatggctagacttcaaagc 385
Query: 186 agtatccctcttctttacaaagctccatctgttaaacccacggcaagtactgtccaacca 245
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 386 agtatccctcttctttacaaagctccatctgttaaacccacggcaagcactgtccaacca 445
Query: 246 gccctcgctgccgctctcctgtgctcatccctcagctcattcactcatccagtaaacacg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gccctcgctgccgctctcctgtgctcatccctcagctcattcactcatccagtaaacacg 505
Query: 306 aattaaaaccctgtctcgttgggcttcctttgctcttgcctacccatcattcaacagcag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aattaaaaccctgtctcgttgggcttcctttgctcttgcctacccatcattcaacagcag 565
Query: 366 ttcccagccggc 377
||||||||||||
Sbjct: 566 ttcccagccggc 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
