Query= MSMg01no109_i03.b1 MSMg01no109_i03.b1 CHROMAT_FILE:
MSMg01no109_i03.b1 PHD_FILE: MSMg01no109_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:45 2005
(432 letters)
>mm_chr15_34286635_34287466
Length = 832
Score = 808 bits (418), Expect = 0.0
Identities = 428/432 (99%), Gaps = 2/432 (0%)
Strand = Plus / Plus
Query: 1 ggagtctggaagggtcatctagaatagtctcacacatctcttggtcaccttgtcctcttc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ggagtctggaagggtcatctagaatagtctcacacatctcttgttcaccttgtcctcttc 260
Query: 61 aggtgtgttcagccatcatgcccaccccttttctgctttctcctctttgaggagcataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgtgttcagccatcatgcccaccccttttctgctttctcctctttgaggagcataaa 320
Query: 121 atattctctgtgtctcatgcccggtgattggctggggcctgggaagctgccagtgcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattctctgtgtctcatgcccggtgattggctggggcctgggaagctgccagtgcctat 380
Query: 181 tttctatgggctggcttagccatgccagatgaattctgacaccaataaataaataaataa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tttctatgggctggcttagccatgccagatgaattctgacaccaataaataaataaatta 440
Query: 241 attaactaattaaactaaagagcttttcttccttcaatttcacaagcagtctttgtcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attaactaattaaactaaagagcttttcttccttcaatttcacaagcagtctttgtcagt 500
Query: 301 cctgcccagcccagcataggcctggtattcccagactcctctcatcctgagggaagtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgcccagcccagcataggcctggtattcccagactcctctcatcctgagggaagtgcc 560
Query: 361 taggc--agggaaaaaaggaaggacccaagcagagctctgcctagcactgtggcatcaaa 418
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggcttagggaaaaaaggaaggacccaagcagagctctgcctagcactgtggcatcaaa 620
Query: 419 gagctcaaagca 430
||||||||||||
Sbjct: 621 gagctcaaagca 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_i03.g1 MSMg01no109_i03.g1 CHROMAT_FILE:
MSMg01no109_i03.g1 PHD_FILE: MSMg01no109_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:46 2005
(288 letters)
>mm_chr15_34359928_34360615
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 1 ccagtcaggataaagaagaaacttaaaatatcttcctgaaatttcaaaggagcattccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccagtcaggataaagaagaaacttaaaatatcttcctgaaatttcaaaggagcattccca 429
Query: 61 agagggaaactgcttgttcaaggtcatatttagtttggcccagagaaactgaattcatta 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 428 agagggaaactgcttgttcaaggtcatatttagtttcgcccagagaaactgaattcatta 369
Query: 121 agaggatgtcattttggataagcctggctgattcaagaactaaataatctgcttttacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agaggatgtcattttggataagcctggctgattcaagaactaaataatctgcttttacta 309
Query: 181 gctgtcgttgggcaatttgaagcaatttgaatgtggaaatgtaaggtgggttagtttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gctgtcgttgggcaatttgaagcaatttgaatgtggaaatgtaaggtgggttagtttcaa 249
Query: 241 tgaatctaataaaaggacaattactgttttgggaggaaaagactcttg 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgaatctaataaaaggacaattactgttttgggaggaaaagactcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
