Query= MSMg01no110_k21.b1 MSMg01no110_k21.b1 CHROMAT_FILE:
MSMg01no110_k21.b1 PHD_FILE: MSMg01no110_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:20 2005
(522 letters)
>mm_chr15_77830128_77831049
Length = 922
Score = 978 bits (506), Expect = 0.0
Identities = 515/518 (99%)
Strand = Plus / Plus
Query: 5 gaattctccctgtgtgaccttcagggccagcctcttaaaagctcatgcagcccctgggag 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctgtgtgactttcagggccagcctcttaaaagctcatgcagcccctgggag 264
Query: 65 ccttggcgggtggattctgcttgctggttgtagctgagcccttccggtagccagtacata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccttggcgggtggattctgcttgctggttgtagctgagcccttccggtagccagtacata 324
Query: 125 ttgcactgagacatggatgtttatctgagacagagggatctttgttggagtgacaccccc 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcactgagacagggatgtttatctgagacagagggatctttgttggagtgacaccccc 384
Query: 185 tgtaccagttctggggtgtatgaaaacaagttttgccccatctttaccaaactgtgttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtaccagttctggggtgtatgaaaacaagttttgccccatctttaccaaactgtgttct 444
Query: 245 gatgaaagagatatataccatcaaacggtaacagagtccctgtctaaaagaactgcaggg 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgaaagagatatatatcatcaaacggtaacagagtccctgtctaaaagaactgcaggg 504
Query: 305 acaaaaatgcagaagagactgaggggaaggaggtccagtgacaggcccaaattgggatcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaaaaatgcagaagagactgaggggaaggaggtccagtgacaggcccaaattgggatcc 564
Query: 365 agctcaaggggaggctccaaggcctgacactattactgatgccatggtgtgcttacagac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agctcaaggggaggctccaaggcctgacactattactgatgccatggtgtgcttacagac 624
Query: 425 aagagcctagcatggctgtcttctgagaggcccaacaagcagacgactgagacagacaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagagcctagcatggctgtcttctgagaggcccaacaagcagacgactgagacagacaca 684
Query: 485 gatatttacattcaaccattggtctgagaggcccaaca 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatatttacattcaaccattggtctgagaggcccaaca 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_k21.g1 MSMg01no110_k21.g1 CHROMAT_FILE:
MSMg01no110_k21.g1 PHD_FILE: MSMg01no110_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:21 2005
(468 letters)
>mm_chr15_77954547_77955415
Length = 869
Score = 870 bits (450), Expect = 0.0
Identities = 462/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 4 ccctctcttgattacttgtgacctttccttctggccttt-ggaggtcttctgagcccctc 62
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 516 ccctctcttgattacttgtgacctttccttctggcctttggggggtcttctgagcccctc 457
Query: 63 taggatgggtctatatgctgactaccctgagcatgcgtgtcttttcctttttctttttcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 taggatgggtctatatgctgactaccctgagcatgcgtgtcttttcctttttctttttcc 397
Query: 123 actcagcaaacccatattgcagacctagtatgtgccaggcaacctggatatcaggctgaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actcagcaaacccatattgcagacctagtatgtgccaggcaacctggatatcaggctgaa 337
Query: 183 ataccaaatacaaaatggagtgtcacgtgagtctgtgctgactctgccacttgtcaagct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ataccaaatacaaaatggagtgtcacgtgagtctgtgctgactctgccacttgtcaagct 277
Query: 243 ttgagtatttaatctcatcagtgtctctatcccctcagcatattgtctgagccaattggc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttgagtatttaatctcatcagtgtctctatcccctcagcatattgtctgagccaattggc 217
Query: 303 aaaggaattccttttcattgtgtacctactatgtgctaggccgtgcgccgtaggttggaa 362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 216 aaaggaattccttttcattgtgtacctactatgtgctaggctgtgcgccgtaggttggaa 157
Query: 363 atacagcgtgaacaaggtggataaaatcgctgccttcctgagatttgcattctgctggga 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atacagcgtgaacatggtggataaaatcgctgccttcctgagatttgcattctgctggga 97
Query: 423 atagaatggaatcaaatgaatgatttgcatccctaattaattaatt 468
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atagaatggaatcaaatgaatgatttgcatccctaattaattaatt 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 869
Length adjustment: 10
Effective length of query: 458
Effective length of database: 859
Effective search space: 393422
Effective search space used: 393422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
