Query= MSMg01no113_f03.b1 MSMg01no113_f03.b1 CHROMAT_FILE:
MSMg01no113_f03.b1 PHD_FILE: MSMg01no113_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:43 2005
(651 letters)
>mm_chr15_92767138_92768189
Length = 1052
Score = 1191 bits (616), Expect = 0.0
Identities = 640/648 (98%), Gaps = 1/648 (0%)
Strand = Plus / Plus
Query: 5 gaattcattcgtatgaagtcaaaaataagctcataaaagatgtactgactgggaaaaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattcgtatgaagtcaaaaataagctcataaaagatgtactgactgggaaaaaaa 264
Query: 65 catgaggtacctctgggaatgcagaaaaggtcctctgccttcatcaaggtgatcgctgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 catgaggtacctctgggaatgcagaaaaggtcctctgccttcatcaaggtgatcgctatg 324
Query: 125 gtatatactcatgcatgcacccctgagctgcacactgagcacaaacatactttctgccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatatactcatgcatgcacccctgagctgcacactgagcacaaacatactttctgccca 384
Query: 185 ttgcatgtgcagattgtgtctaagctgaagagagttaaaagcagtcatattccactcctc 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 ttgcatgtgcagattgtgtctaagctgaagagagttaaaagcggtcatattccactcctc 444
Query: 245 aaacctcctgagtcaggaggacctcatacagacttagcaaaattaaaatgtacgtagtcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaacctcctgagtcaggaggacctcatacagacttagcaaaattaaaatgtacgtagtcg 504
Query: 305 atggtgaaactccaacatgacaggccacggcagattctgagagcaattgaattgactcag 364
| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 505 acggtgaaactccaacatgacaggccacggcaaattccgagagcaattgaattgactcag 564
Query: 365 tgcactctcataatgagattccgcaagtttggatttagctgagagcacagaaacactcca 424
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgctctctcataatgagattccgcaagtttggatttagctgagagcacagaaacactcca 624
Query: 425 caggagccataaagaacggttgaacaagctgttatattccttttttgagcatatttttta 484
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caggagccattaagaacggttgaacaagctgttatattccttttttgagcatatttttta 684
Query: 485 atgaaaaggatatttgaatacctaactgtaaatgaaatggacatttaaatataccagtga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgaaaaggatatttgaatacctaactgtaaatgaaatggacatttaaatataccagtga 744
Query: 545 gctaagacaatggagattcattaatgtctaataaactaaatcaaggatttacaatgggaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctaagacaatggagattcattaatgtctaataaactaaatcaaggatttacaatgggaa 804
Query: 605 aggataagaaaaaaa-tggaaggtgctttttgttcatttacagccaat 651
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 805 aggataagaaaaaaaatggaaggtgctttttgttcatttacagccaat 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_f03.g1 MSMg01no113_f03.g1 CHROMAT_FILE:
MSMg01no113_f03.g1 PHD_FILE: MSMg01no113_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:43 2005
(596 letters)
>mm_chr15_92828663_92829658
Length = 996
Score = 855 bits (442), Expect = 0.0
Identities = 457/462 (98%)
Strand = Plus / Minus
Query: 1 ccatctgcgtgatgtcaggggcgagaaacagagaaatccaatgtccgtggccaacagcgt 60
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 657 ccatctgtgtgatgtcaggggcgagaaacagagaaatccaatgtccgtgcccaacagcgt 598
Query: 61 agcttttctcatagagtcatcatttagtaaaacagaaccttcaaggttggattagaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agcttttctcatagagtcatcatttagtaaaacagaaccttcaaggttggattagaatct 538
Query: 121 gctgtgttttctctcacttagttttatttgtttctcccaggcagggccaggttggcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctgtgttttctctcacttagttttatttgtttctcccaggcagggccaggttggcctcc 478
Query: 181 aactcacaatcctgcttctgtctcccaagcacccaagctttgcgggcaggtgctccgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aactcacaatcctgcttctgtctcccaagcacccaagctttgcgggcaggtgctccgcag 418
Query: 241 actccttccccagcacagtgtgctagacgtcctcagtgtctttcactgcgggatcctaca 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 417 actccttccccagcacagtgtgctagacgtcctcagtgtctttcactgagggattctaca 358
Query: 301 tcgctcgatttccatacttgaagcaacacaggacaatggtgtcagtggaagggtgacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcgctcgatttccatacttgaagcaacacaggacaatggtgtcagtggaagggtgacaaa 298
Query: 361 ggatttgacagggaacatgaaatacgggaagagctgctatttgtagagaaagatgccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggatttgacagggaacatgaaatacgggaagagctgctatttgtagagaaagatgccaaa 238
Query: 421 ggggccaggggaaagggtcgcaggagtgcattttccctttct 462
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 237 ggggccaggggaaaggatcgcaggagtgcattttccctttct 196
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
