Query= MSMg01no114_o05.b1 MSMg01no114_o05.b1 CHROMAT_FILE:
MSMg01no114_o05.b1 PHD_FILE: MSMg01no114_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:41 2005
(228 letters)
>mm_chr15_24371861_24372488
Length = 628
Score = 395 bits (204), Expect = e-114
Identities = 219/224 (97%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 6 gaattctactat-ctttcatataatagattacatcattactcctaaagattagctaacat 64
|||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||||||
Sbjct: 428 gaattctactatccttt-atatattagattacctcagtactcctaaagattagctaacat 370
Query: 65 cagtgttccttacactattgccaaatatatattgaattagtaattaaaaatgcattctac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cagtgttccttacactattgccaaatatatattgaattagtaattaaaaatgcattctac 310
Query: 125 aaaagtattgatcaacttaattattgagggagttgtaaaaatcctcagtgcaatcctcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaagtattgatcaacttaattattgagggagttgtaaaaatcctcagtgcaatcctcag 250
Query: 185 aacacagattcaacaacacactagaaaaactcttgtgtacgatc 228
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aacacagattcaacaacacactagaaaaactcttgtgtacgatc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no114_o05.g1 MSMg01no114_o05.g1 CHROMAT_FILE:
MSMg01no114_o05.g1 PHD_FILE: MSMg01no114_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:41 2005
(285 letters)
>mm_chr15_24222537_24223221
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 1 attcttctcactgacttatgtaatgtgccctacgattctagttggcgagcatttgagaaa 60
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 201 attcttctcactgacttatgtaatgtgccctaagattctagttggtgagcatttgagaaa 260
Query: 61 atctttccatttatctctgtctatgtatttctctcctcccataccatgaccactggtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctttccatttatctctgtctatgtatttctctcctcccataccatgaccactggtttc 320
Query: 121 tgttcttattctcaacgggattcttatattctgcgatattacatagtggtgttgtagtat 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tgttcttattctcaacgggattcttatattctgtgatattacatagtggtgttgtagtat 380
Query: 181 tccagagtaatccaaaattttcatttttgataagacaaaactatatttgaaatgattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagagtaatccaaaattttcatttttgataagacaaaactatatttgaaatgattgag 440
Query: 241 cccatataatatttgcaggagagtaaaaatttttaattgttttca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccatataatatttgcaggagagtaaaaatttttaattgttttca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
