Query= MSMg01no115_f17.b1 MSMg01no115_f17.b1 CHROMAT_FILE:
MSMg01no115_f17.b1 PHD_FILE: MSMg01no115_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:17 2005
(320 letters)
>mm_chr15_90414923_90415643
Length = 721
Score = 540 bits (279), Expect = e-158
Identities = 306/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggcaggaaatgtgggacaatcatactgacggcagaggagctaaactgctgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggaattccaggcaggaaatgtgggacaatcatactgacggcagaggagctaaactgctgc 390
Query: 64 agggtaagcaaatattttctttgtttaaaattatttttatttacaaagattttactggtt 123
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 389 agggtaagcgaatattttctttgtttaaaattatttttatttacaaatattttactggtt 330
Query: 124 ttggagtattccagataacacactttgataatagtccctccctcaattccatattccctt 183
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 329 ttagagtattccagataacacactttgataatagtccctccctcagttccatattccctt 270
Query: 184 ctttagagacccaattgtatgtccactttaaaaataaaaacaaaagcacaccaaaaaaa- 242
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 269 ctttagagacccaattgtatgtccactttaaaaataaaaacaaaaacacaccaaaaaaaa 210
Query: 243 gcatccagtccaatctgtgctctccttatactttgagtcatgtggccatccactggaggg 302
|||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcatccagtctaatctgtgctgttcttatactttgagtcatgtggccatccactggaggg 150
Query: 303 tggtggacctaccag 317
|||||||||||||||
Sbjct: 149 tggtggacctaccag 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_f17.g1 MSMg01no115_f17.g1 CHROMAT_FILE:
MSMg01no115_f17.g1 PHD_FILE: MSMg01no115_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:17 2005
(126 letters)
>mm_chr15_90341324_90341849
Length = 526
Score = 224 bits (116), Expect = 1e-63
Identities = 122/124 (98%)
Strand = Plus / Plus
Query: 1 gtggagatgctggtgtgactcgcagtcattcaaaagcctgatgtgagctaaagtacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggagatgctggtgtgactcgcagtcattcaaaagcctgatgtgagctaaagtacaaag 260
Query: 61 cacatgaatgtgccatagggttgcttccaatgacatgtcagtcagcttccccagaatgac 120
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 261 cacatgaatgtgccatagggttgcttccaatgacatggcagccagcttccccagaatgac 320
Query: 121 taaa 124
||||
Sbjct: 321 taaa 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
