Query= MSMg01no118_c24.b1 MSMg01no118_c24.b1 CHROMAT_FILE:
MSMg01no118_c24.b1 PHD_FILE: MSMg01no118_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:57 2005
(194 letters)
>mm_chr15_56595238_56595831
Length = 594
Score = 375 bits (194), Expect = e-109
Identities = 194/194 (100%)
Strand = Plus / Plus
Query: 1 agcctttctattggtcagaaggaagtcaaagactctaaatgcatcctagtgaaggtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcctttctattggtcagaaggaagtcaaagactctaaatgcatcctagtgaaggtgttc 260
Query: 61 acaggccgtgactcactggaggttacttcggggtgcttcctaatcagactatcacacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaggccgtgactcactggaggttacttcggggtgcttcctaatcagactatcacacatc 320
Query: 121 gatttgtttgttatctctttctatcttgcctgttaagtagcacacactatagaagataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttgtttgttatctctttctatcttgcctgttaagtagcacacactatagaagataag 380
Query: 181 actactgaatgaat 194
||||||||||||||
Sbjct: 381 actactgaatgaat 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_c24.g1 MSMg01no118_c24.g1 CHROMAT_FILE:
MSMg01no118_c24.g1 PHD_FILE: MSMg01no118_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:57 2005
(236 letters)
>mm_chr15_56760833_56761468
Length = 636
Score = 410 bits (212), Expect = e-119
Identities = 230/242 (95%), Gaps = 12/242 (4%)
Strand = Plus / Minus
Query: 1 ttctcagagaagccaacgtgcaacaaaacagagagaggatgaagagagtggggtgaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttctcagagaagccaacgtgcaacaaaacagagagaggatgaagagagtggggtgaacaa 377
Query: 61 ttgagaaataggctgttaacacgcattctggttcagaagctgaagtcaaagtatttatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttgagaaataggctgttaacacgcattctggttcagaagctgaagtcaaagtatttatgg 317
Query: 121 aatttagtcacaaaaacaacaaatgggaatctttagtgggagaaagttgactgttagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aatttagtcacaaaaacaacaaatgggaatctttagtgggagaaagttgactgttagtaa 257
Query: 181 acccatgctcttcctg--ttttttt----tgttctcatgatgatgtttgaaagcccccat 234
|||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 256 acccatgctcttcctgca------tggaatgttctcatgatgatgtttgaaagcccccat 203
Query: 235 ag 236
||
Sbjct: 202 ag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
