CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTC
ACGCTGAATACCCAATGAGTCTGAAGAGCATACTTTGATGATTCTGTCAT
ATTCTTTCAGAAAAGTCTTCTCCTGACAATAATAGTTTGTAATATACAAA
AGTTAAATTGAATGTTTTAATTTCTTAAAAATATATTATTTTCCCAGAGC
TTTCTGTGTCTCTAGTTGCATATGTAGCAGAGGATGGCCTAATTGGCAAT
CAATGAGAGAAAAGGCCCTTGATCTTGCAAAGATTATATGCCCCAGCACA
GGGGAATGCTAGGGCCAGGAGGCGGGAGTGGATGGGTTGGGGAGCAGGGC
AGGGGGAGGATATAGGGGCCTTTGAGAATAGCATCTGAAATGTAAATGAA
AAAAATATCTAATAAAAATATATAATATTTTATATATATATATATAATGT
CAACTTTAATTTGATGTATTTTTATGCTTGTAAAATTATACTGAATTCTA
AATTAATTTATGTAAACTGCCCTTTCCTTTGCATTGTTTCTGTGTACTTA
GCTGATCAAAGATTTGCTGTGAGGCCAGCTTCCATGTATTTAACAATATT
GACCTTAAGTCTCTGGCCTTCTTCCTTTTTATTTCTTTTGTGATGAATTA
ATAAATTGATATGCTTATTATACTGTCCATGAATA

NNATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCCATTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTTGGGTTTATAT
ATATATTGGATATTAGTCTCTGGTGAAAAGTATGGTGTAATTCTGATAGG
CCTACCTTTATATGTTACTTTACCTTTTTCCCTTACTGCTTTTAATATTC
TATCTTTATTTGGTGCATTTGTTGTTCTGATTATTATGTGTTGAGAGGAA
TTTCTTTTCTGGTCCTGTCTATTTGGAGTTCTGTAGGCTTCTTGTATGTT
CATAGGCATCTCTTTCTTTAGGTTTGGGAAGCTTTCTTCTATAATTTTGT
TGAAGATATTTTCTGGCTCTTTAAGTTGAACATCTTCATTCTCATCTACT
CCTATTATCCATAGGTTTGGTCTTCTCACTGTGTCCTGGATTTTCTGGAT
GTTTTGAGTTCGGTTCTTTTTGCATTTTGCATTGTCTTTGATTGTTGTGC
CGATATTCTCTATGGAATCTTCTGCACCTGAGATTCTCTCTTCCATCTCT
TGTATTCTGTTGCTGATGCTCGCATCTATGTTTCAAGATTTCTTTCCTAG
GGTTTCTATCTCCAGCGTTGCCTCACTGTGGGTTTT

Query= MSMg01no118_k20.b1 MSMg01no118_k20.b1 CHROMAT_FILE:
MSMg01no118_k20.b1 PHD_FILE: MSMg01no118_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:36 2005
         (555 letters)



>mm_chr15_47964023_47964977
          Length = 955

 Score =  621 bits (321), Expect = 0.0
 Identities = 339/347 (97%), Gaps = 5/347 (1%)
 Strand = Plus / Minus

                                                                       
Query: 210 atcaatgagagaaaaggcccttgatcttgcaaagattatatgccccagcacaggggaatg 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 atcaatgagagaaaaggcccttgatcttgcaaagattatatgccccagcacaggggaatg 896

                                                                       
Query: 270 ctagggccaggaggcgggagtggatgggttggggagcagggcagggggaggatatagggg 329
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ctagggccaggaggcaggagtggatgggttggggagcagggcagggggaggatatagggg 836

                                                                       
Query: 330 cctttgagaatagcatctgaaatgtaaatgaaaaaaatatctaataaaaatatataatat 389
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 835 cctttgagaatagcatctgaaatgtaaatgaaaataa-atctaataaaaatatataatat 777

                                                                       
Query: 390 tt----tatatatatatatataatgtcaactttaatttgatgtatttttatgcttgtaaa 445
           ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tttatatatatatatatatataatgtcaactttaatttgatgtatttttatgcttgtaaa 717

                                                                       
Query: 446 attatactgaattctaaattaatttatgtaaactgccctttcctttgcattgtttctgtg 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 attatactgaattctaaattaatttatgtaaactgccctttcctttgcattgtttctgtg 657

                                                          
Query: 506 tacttagctgatcaaagatttgctgtgaggccagcttccatgtattt 552
           ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 656 tacttagctgatcaaagatttgctgtgaggccagcttccatctattt 610


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)