Query= MSMg01no120_i08.b1 MSMg01no120_i08.b1 CHROMAT_FILE:
MSMg01no120_i08.b1 PHD_FILE: MSMg01no120_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:59 2005
(437 letters)
>mm_chr15_85692030_85692864
Length = 835
Score = 766 bits (396), Expect = 0.0
Identities = 427/438 (97%), Gaps = 4/438 (0%)
Strand = Plus / Plus
Query: 1 tattactttactgagagattcatagcagctgtgaaaccagtgctttcctgttttatcgtt 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 201 tattactttactgagagattcatagcaactgtgaaaccagtgctttcctgttttat-gtt 259
Query: 61 accctaaaataacagtgaactttttctccccatccccaccccagactttcttcttttgga 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 accctaaaataac--tgaactttttctccccatccccaccccagactttcttcttttgga 317
Query: 121 agatgaaaaatttgacttcgatctttccttgtcttcttcaaggtaaccatgcgttttctt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 318 agatgaaaaatttgacttcgatctttccttgtcttcttcaaggtaaacatgcgttttctt 377
Query: 181 ccctaacccctggcatagacaggttcatccaagcccctcacctagatgctggtgtga-tt 239
||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 378 ccctaacccctggtatagacaggttcatcaaagcccctcgcctagatgctggtgtgattt 437
Query: 240 cagccctgatcatctttttctttaaacgcagcacaaatgaagatgacgaagtcttttttg 299
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 438 cagccctgataatctttttctttaaacgcagcacaaatgaagatgatgaagtcttttttg 497
Query: 300 ggcctgttggacataaagaaagatgcattgctgccagtttggacttaaaccgccgggttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggcctgttggacataaagaaagatgcattgctgccagtttggacttaaaccgccgggttc 557
Query: 360 ctgggcagcctcttgccccgggctctggtagcccttgcaccttgagccctctcactgggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgggcagcctcttgccccgggctctggtagcccttgcaccttgagccctctcactgggg 617
Query: 420 agaagtttgtggaggtgt 437
||||||||||||||||||
Sbjct: 618 agaagtttgtggaggtgt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 835
Length adjustment: 9
Effective length of query: 428
Effective length of database: 826
Effective search space: 353528
Effective search space used: 353528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_i08.g1 MSMg01no120_i08.g1 CHROMAT_FILE:
MSMg01no120_i08.g1 PHD_FILE: MSMg01no120_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:59 2005
(190 letters)
>mm_chr15_85763210_85763799
Length = 590
Score = 368 bits (190), Expect = e-106
Identities = 190/190 (100%)
Strand = Plus / Minus
Query: 1 tgctgggactaaaagcatgcaccatggtgcctggccttaactgcattcatttaaaattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgctgggactaaaagcatgcaccatggtgcctggccttaactgcattcatttaaaattct 297
Query: 61 gttataggctaagtgcaatactctagatttacatgtatgttgttaaacaagattaggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gttataggctaagtgcaatactctagatttacatgtatgttgttaaacaagattaggtct 237
Query: 121 tcacaaactggtattgtatttaattcccaacccctttgtgtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcacaaactggtattgtatttaattcccaacccctttgtgtgtgtgtgtgtgtgtgtgtg 177
Query: 181 tgtgtgtgtg 190
||||||||||
Sbjct: 176 tgtgtgtgtg 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
