CTATTTNNNNNGTCACTGGGCGCTAAXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTCAGTTCTGACTTCATTTTTTAATGGGGTTATTTGAT
TTTCTGAAGTCCTCTTTTCTTGAGTTCTTTATATATGTTGGATATTAGTC
CCCTATCTGATTTAGGATAGGTAACGATCCTTTCCCAATCTGTTGGTGGT
CTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTT
CATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGATG
TTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCC
ACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGATCCTT
GATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCTTATT
CGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAA
AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA
AGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAT
TGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAAT
TGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTC
TTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCAG
ACAAATTTGCAAATTGCTCCTTTCAATTCGTTGAAGAATTGAGTTGGAAT
TTTGATGGGGATTGCATTGATTCTGTAGATTGCTTTTGGCCAGATAGCCA
TTTTTTACAATGTTTGAATCCTGCCCAATCCATGAGCATGGGGAGATCTT
TTCCATCTTCTGAAAATCTTCCTTTAAATTCTTTTCCTTTCAAAGATTTG
AAGGTTTTTTATCATTACCAGATCTTTTCCACTTTCCCTTTACTTTAAAG
TTCCCGCCCCAAGAATAATTTTTAATATTTATTTTGGGGGACCCTATTGT
ATAAAGGGGCGGGTTTATTTTTCCCCTAAATTTTTTCTTTTCCTCCCCCC
CCGTGTTTTTA

CTAATTTTTTNNTACGAAGGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTTAACATTTATTTCTTAAATGAA
TATATGTGAAATTAGACCTAAGAGCTGATGATTACTCATAAAGAGAAATA
AACATCAAGGGTAGCTAAGTAGATTTATTCTTAATTGAACTAATCAAAGG
TGTATTAATGTTACATCGTATTAATTCCTGGCCCTCAGTCAACTATTTCC
AGATTTGGACCTAAGAGAACTGAAAACATACATTCAAAGAGATTTTGCAA
AAGAAGTGAGACAACACTATTTTGAGCAAAGAAATGGCAAAAAAAGTGTA
CATTGTAAAGATTGACAACAGTACACCAATGAGAACACTCAAAGAACCCA
GGGATTGTTTAAGGCTTCCTTTTATGGGCTTTAAGACAAGGAAGTTAGTT
ACGAATGGTAAGAATTGAGTGGCTGTATATTTTAAATGCCAGAAAAGGTC
ATATATTCATTTTTTTCTTATTGCCCATGTTCCTACTCATAATGCATCAG
AGTTTAATCATAACTCACCTAAAAATCAAATGCGTAAAATGGTAAATAGG
TTTTCCATGTAAATTATGCAGTGTGCCTTACTGTACATGCAGCTAAAACC
AGTTCAGGATGCAGCAAGCTTTCTATTCTTCAGACTCAGATACTTTGGGA
ATACAGTTGAACCAAAATTATCTAAATATGATTGTTCCTGGGTGTGAGGA
AATCAATATTGTTGTTTAGAGATAGGTGTGCATGTAACTTGATGCAGGCT
GAGGATAGAAAGGTTTCTGAAGTTGGTAGGTTTAGTGCTTGAAGAGGGCT
GTGTGTATATTTACACATGCCGATGAAGGGTCAAGTATACCAAGAGCATT
TCTTATAAGGGGGTGGGTGTGCATAACCCAAATTAAACAGCCCCAGGGTT
ACTAAACTATTCTCTAAGGGTTGTTGGGTTCCCAAAAACATTTTCCCTCT
GAATATGAAGAATATCCCTAAACCCCTTCCAGAACCTTTTGTTAATGGAA
TAAAAGGTATCCTAGGCAATCTCCCAATGGTTCCAAGGGTTTGGCTTGG

Query= MSMg01no122_n09.g1 MSMg01no122_n09.g1 CHROMAT_FILE:
MSMg01no122_n09.g1 PHD_FILE: MSMg01no122_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:45 2005
         (725 letters)



>mm_chr15_67456442_67457568
          Length = 1127

 Score = 1241 bits (642), Expect = 0.0
 Identities = 705/726 (97%), Gaps = 4/726 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttaa-catttatttcttaaatgaatatatgtgaaattaga-cctaagagctgatgattac 60
           |||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 927 ttaaccatttatttcttaaatgaatatatgtgaaattggatcc-aagagctgatgattac 869

                                                                       
Query: 61  tcataaagagaaataaacatcaagggtagctaagtagatttattcttaattgaactaatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tcataaagagaaataaacatcaagggtagctaagtagatttattcttaattgaactaatc 809

                                                                       
Query: 121 aaaggtgtattaatgttacatcgtattaattcctggccctcagtcaactatttccagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 808 aaaggtgtattaatgttacatcgtattaattcctggccctcagtcaactatttccaggtt 749

                                                                       
Query: 181 tggacctaagagaactgaaaacatacattcaaagagattttgcaaaagaagtgagacaac 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tggacccaagagaactgaaaacatacattcaaagagattttgcaaaagaagtgagacaac 689

                                                                       
Query: 241 actattttgagcaaagaaatggcaaaaaaagtgtacattgtaaagattgacaacag-tac 299
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 688 actattttgagcaaaggaatggcaaaaaaagtgtacattgtaaagattgacaacagctac 629

                                                                       
Query: 300 accaatgagaacactcaaagaacccagggattgtttaaggcttccttttatgggctttaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 accaatgagaacactcaaagaacccagggattgtttaaggcttccttttatgggctttaa 569

                                                                       
Query: 360 gacaaggaagttagttacgaatggtaagaattgagtggctgtatattttaaatgccagaa 419
           || ||||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 568 gaaaaggaagttagttacaaatggtcagagttgggtggctgtatattttaaatgccagaa 509

                                                                       
Query: 420 aaggtcatatattcatttttttcttattgcccatgttcctactcataatgcatcagagtt 479
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 508 aaggtcatatattcatttttttcttattgcccatgttcctacccataatgcatcagagtt 449

                                                                       
Query: 480 taatcataactcacctaaaaatcaaatgcgtaaaatggtaaataggttttccatgtaaat 539
           |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 448 taatcataactcacctaaaaatcaaacgcgtaaaatggtaaatagattttccatgtaaat 389

                                                                       
Query: 540 tatgcagtgtgccttactgtacatgcagctaaaaccagttcaggatgcagcaagctttct 599
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 388 tatgcagtgtgccttactgtgcatgcagccaaaaccagttcaggatgcagcaagctttct 329

                                                                       
Query: 600 attcttcagactcagatactttgggaatacagttgaaccaaaattatctaaatatgattg 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attcttcagactcagatactttgggaatacagttgaaccaaaattatctaaatatgattg 269

                                                                       
Query: 660 ttcctgggtgtgaggaaatcaatattgttgtttagagataggtgtgcatgtaacttgatg 719
           |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 268 ttcctgggtgtgaggaaatctattttgttgtttagagataggtgtgcatgcaacttgatg 209

                 
Query: 720 caggct 725
           ||||||
Sbjct: 208 caggct 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 725
Length of database: 1127
Length adjustment: 10
Effective length of query: 715
Effective length of database: 1117
Effective search space:   798655
Effective search space used:   798655
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)