Query= MSMg01no124_d16.b1 MSMg01no124_d16.b1 CHROMAT_FILE:
MSMg01no124_d16.b1 PHD_FILE: MSMg01no124_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:02 2005
(370 letters)
>mm_chr15_90602980_90603749
Length = 770
Score = 538 bits (278), Expect = e-157
Identities = 355/400 (88%), Gaps = 30/400 (7%)
Strand = Plus / Plus
Query: 1 gacctcagggattcactttccagccactctgaccaaaacaggtagctataggctcagcca 60
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 171 gacctcagggattcactttccagccactctgaccaaaacagctaggtataggctcagcca 230
Query: 61 aaggactcgtcccaaaacgtaaggtggaaagtggtagagaaggtaccctaaatcaacctc 120
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aaggacttgtcccaaaacataaggtggaaagtggtagagaaggtaccctaaatcaacctc 290
Query: 121 aaccctccacatacatgtgcacagaggagtgtgagcatgcaagacagacagactgacaga 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agccctccacatacatgtgcacagaggagtgtgagcatgcaagacagacagactgacaga 350
Query: 181 cacaatatatatatat------------------------------tcacaagcaactgg 210
|||||||||||||||| ||||||||||||||
Sbjct: 351 cacaatatatatatatatatatatatatatatatatatatatatattcacaagcaactgg 410
Query: 211 aaatagtagcaattaaatgtgtatctccagtttttaaatataatatttttataaaatcct 270
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 411 aaatagtagcaattaaatgtgtatctccagcttttaaatataatgtttttataaaatcct 470
Query: 271 tgagaattttacaaactgtaatttgatcatattcagtcctacttctccattttattcctc 330
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 471 tgagaattttacaaactgtaatttgatcatattcagtcccacttctccattttattcctc 530
Query: 331 ccagattttttcttacccccctatgcatgcagcttcatgt 370
|||||| | |||||| ||||||||| |||||||||||
Sbjct: 531 ccagatccatccttacctccctatgcacacagcttcatgt 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_d16.g1 MSMg01no124_d16.g1 CHROMAT_FILE:
MSMg01no124_d16.g1 PHD_FILE: MSMg01no124_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:03 2005
(334 letters)
>mm_chr15_90762211_90762944
Length = 734
Score = 584 bits (302), Expect = e-171
Identities = 323/330 (97%)
Strand = Plus / Minus
Query: 1 ataaactttaatccagcacttagaataaccttaactttctctatcagaactgacttcaag 60
||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 355 ataaactttaatccagcacttagaataactttaaccttctctatcagaactaacttcaag 296
Query: 61 cacgacctccttgtgaagttacaatacctaaataccaagcagtgacaggtttcaccagtg 120
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 295 cacgacctccttatgaagttacaatacccaaataccaagcagtgacaggtttcaccagtg 236
Query: 121 aacttctttgacccgaaatgttctaaaatttttaatttacttttatttatgtgtctgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aacttctttgacccgaaatgttctaaaatttttaatttacttttatttatgtgtctgtgt 176
Query: 181 gtgcacccacttgtctgtgtgtgcacagtgtgtatgcagattcttatgacagccagacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gtgcacccacttgtctgtgtgtgcacagtgtgtatgcagattcttatgacagccagacga 116
Query: 241 gggcgtcctggagctggcgttacagacagggaactaaacccgttcagttcaaaattagca 300
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 115 gggtgtcctggagctggcgttacagacagggaactaaactcgttcagttcaaaattagca 56
Query: 301 agtgtttttaaccactaatccgcctctgta 330
||||||||||||||||||||||||||||||
Sbjct: 55 agtgtttttaaccactaatccgcctctgta 26
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
