Query= MSMg01no124_p03.b1 MSMg01no124_p03.b1 CHROMAT_FILE:
MSMg01no124_p03.b1 PHD_FILE: MSMg01no124_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:44 2005
(706 letters)
>mm_chr15_35380272_35381377
Length = 1106
Score = 1311 bits (678), Expect = 0.0
Identities = 699/706 (99%)
Strand = Plus / Minus
Query: 1 ggcagtacactagaactgcacacaacaactagaatgtttaaattttaaaaattgaaatta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 866 ggcagtacactagaactgcacacaataactagaatgtttaaattttaaaaattgaaatta 807
Query: 61 ctacgttttgagaggtatctgggggatgagtcagcaaacactttctgcagagtcattctg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ctaagttttgagaggtatctgggggatgagtcagcaaacactttctgcagagtcattctg 747
Query: 121 taaataagtattaggctttgtgggtcagtctgtcacaattattcacaaaagcagctaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 taaataagtattaggctttgtgggtcagtctgtcacaattattcacaaaagcagctaaag 687
Query: 181 acaatgaacagccaaagagctccaacaaatctgtatttatgggacttgatgtagctaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 686 acaatgaacagccaaagagctccaacaaatctgtatttatgggacttgatgtaactaaga 627
Query: 241 agttgtctagcatttatgaggtcttgggttcaaaatacatatatacattaaagatattca 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 626 agttgtctagcatttatgaggtcttgggttcaaaatacatacatacattaaagatattca 567
Query: 301 catataaatttcatataactttagtatgtacaaaatgaaattctttaattatttaagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 catataaatttcatataactttagtatgtacaaaatgaaattctttaattatttaagata 507
Query: 361 taaaaccatttctgcctaaggaccataatcatctggtagcaggctataacctgatcaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taaaaccatttctgcctaaggaccataatcatctggtagcaggctataacctgatcaaaa 447
Query: 421 gcaatcagaagtttcacagtcagattataggagtaaaatgtcaaccattcataaatgcag 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcaaccagaagtttcacagtcagattataggagtaaaatgtcaaccattcataaatgcag 387
Query: 481 tttggaagtatctcctgaaagtaaaaatataatcattttaatcatttataattattataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttggaagtatctcctgaaagtaaaaatataatcattttaatcatttataattattataa 327
Query: 541 tcatttaagctagcagttgctatgaaaaaaagcaaaagacctaaaaactaaccaaatatt 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 326 tcatttaagctagcagttgctatgaaaaaaagcaaaagacctaaaaattaaccaaatatt 267
Query: 601 tactggaagtgaaatagattatatccattttaattattattatattcattttattattta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tactggaagtgaaatagattatatccattttaattattattatattcattttattattta 207
Query: 661 ttacattcattttacatatttatccaaattatattcacccaaaaga 706
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttacatttattttacatatttatccaaattatattcacccaaaaga 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no124_p03.g1 MSMg01no124_p03.g1 CHROMAT_FILE:
MSMg01no124_p03.g1 PHD_FILE: MSMg01no124_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:44 2005
(331 letters)
>mm_chr15_35227311_35228041
Length = 731
Score = 569 bits (294), Expect = e-166
Identities = 320/333 (96%), Gaps = 8/333 (2%)
Strand = Plus / Plus
Query: 1 gacttttcatggnttaactttcctcgcaaaattaaaggtaaccagtggtccgaaacatgc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacttttcatggtttaactttcctcgcaaaattaaaggtaaccagtggtccgaaacatgc 260
Query: 61 tagtggagagatgacagcagagggcccatagttagtgcctgagatggagtaagtccgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtggagagatgacagcagagggcccatagttagtgcctgagatggagtaagtccgcag 320
Query: 121 ccccaacaaaacgaaagtaccttagttccatgggttgacttgagcgatggtttgacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ccccaacaaaacgaaagtaccttagttccatgggttgacttgagcgatgatttgacttac 380
Query: 181 attgctagagactaaacagaggcgtgggaatctgaactccctggttatttatgtttggta 240
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 attgctagagactaaacaggggcgtgggaatctgaactctctggttatttatgtttggta 440
Query: 241 ggtgtttaagggcactctatttgtaaagagatatcatatttt----agactggcttgctc 296
|||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 441 ggtgtttaagggcactctatttgtaaagagatatcaga----gggcagactggcttgctc 496
Query: 297 ttcctcaaaccagatgactcttccttgcaaaga 329
|||||||||||||||||||||||||||||||||
Sbjct: 497 ttcctcaaaccagatgactcttccttgcaaaga 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
