Query= MSMg01no125_a14.b1 MSMg01no125_a14.b1 CHROMAT_FILE:
MSMg01no125_a14.b1 PHD_FILE: MSMg01no125_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:56 2005
(606 letters)
>mm_chr15_26484759_26485764
Length = 1006
Score = 1065 bits (551), Expect = 0.0
Identities = 590/603 (97%)
Strand = Plus / Plus
Query: 4 gaattctttgagagctttcaggaggctataatcataactgaataaataacacctgatatt 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctttgagagctttcagaaggctataatcataactgaataaataacacctgatatt 263
Query: 64 tacaaaacaataaaatgatggcctaatcttgagataagcatacctagaagttgtcacaaa 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacaaaacaataaaatgatggtctaatcttgagataagcatacctagaagttgtcacaaa 323
Query: 124 atacctttcttgatattgtcttaaacatatgaaatccaaattttaagcttaaaaggtgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atacctttcttgatattgtcttaaacatatgaaatccaaattttaagcttaaaaggtgaa 383
Query: 184 taatacatgtatatgcatttccatttagacatgcacttgattatatttgattataaatag 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatacatgtatatacatttccatttagacatgcacttgattatatttgattataaatag 443
Query: 244 aacggttgctagacaataagtcaaggagctttttactgacacaagatatggcttatagaa 303
||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 444 aacagttgctagacaataagtcaaggagctatttgctgacacaagatatggcttatagaa 503
Query: 304 acagatgcctcacagagctatcaagataccacatcatgttggtacactgaaaagacagaa 363
||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acagatgactcatggagctatcaagataccacatcatgttggtacactgaaaagacagaa 563
Query: 364 tatagcttccacttcaaacaggaaccacctatgtctcaggtagcagatatcatgtgcacc 423
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatagcttccacttcacacaggaaccacctatgtctcaggtagcagatatcatgtgcacc 623
Query: 424 agcaaatgcagaaacaccaatccaccctttatacataattctttttcccacccatccttt 483
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 agcaaatgcagaaacaccaatccaccctttatacataattcttcttcccacccatccttt 683
Query: 484 ccggctaagcagctaaatggcactggtattagctgctgactttttcaagtaagcttagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccggctaagcagctaaatggcactggtattagctgctgactttttcaagtaagcttagaa 743
Query: 544 agaaggacggacctctacaccaacactgcaaaagcacttggaagagtagctcgaggatac 603
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaaggacggacctctatgccaacactgcaaaagcacttggaagagtagctcgaggatac 803
Query: 604 atc 606
|||
Sbjct: 804 atc 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_a14.g1 MSMg01no125_a14.g1 CHROMAT_FILE:
MSMg01no125_a14.g1 PHD_FILE: MSMg01no125_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:56 2005
(569 letters)
>mm_chr15_26657040_26658009
Length = 970
Score = 1087 bits (562), Expect = 0.0
Identities = 568/570 (99%), Gaps = 1/570 (0%)
Strand = Plus / Minus
Query: 1 ctcctctgaactcaatgaagagctgtgatgtggacctgtaaactaaaataaaccctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ctcctctgaactcaatgaagagctgtgatgtggacctgtaaactaaaataaaccctttcc 833
Query: 61 ttcccaagttgctcttggtaaacacgttttattgcagcaatcgaagtatcctaaccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ttcccaagttgctcttggtaaacacgttttattgcagcaatcgaagtatcctaaccaaga 773
Query: 121 cagtattgcgcattgagggcatcttaccctgcttctctgattgtttcagttcttgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cagtattgcgcattgagggcatcttaccctgcttctctgattgtttcagttcttgtgtgt 713
Query: 181 ctatcagccaggaagctatctttgattatgttattgcatgtgtaaactgtaagaaatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctatcagccaggaagctatctttgattatgttattgcatgtgtaaactgtaagaaatgta 653
Query: 241 tacaacgtatataaatgaagatagtctctagagtataggagggag-aaaaaaaatggcct 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 652 tacaacgtatataaatgaagatagtctctagagtataggagggagaaaaaaaaatggcct 593
Query: 300 gaaatccaaagtacacagaggaaagctctttccctgaaaggcattttaagactaaatgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaaatccaaagtacacagaggaaagctctttccctgaaaggcattttaagactaaatgaa 533
Query: 360 aggcacctgtatagtgcagatatctgattggaatgggaggaggaagggagatatgtaaga 419
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aggcacctgtataatgcagatatctgattggaatgggaggaggaagggagatatgtaaga 473
Query: 420 gaatattccagctatatcctcaattcagccacattaaaagctgaattagaggttgtagag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaatattccagctatatcctcaattcagccacattaaaagctgaattagaggttgtagag 413
Query: 480 aaaacttcaggcagatctaggtttgaatttgaccatagccttttagtaaatgtacagtat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaaacttcaggcagatctaggtttgaatttgaccatagccttttagtaaatgtacagtat 353
Query: 540 tgtctggttactttgcataacagctctcta 569
||||||||||||||||||||||||||||||
Sbjct: 352 tgtctggttactttgcataacagctctcta 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
