Query= MSMg01no125_f15.b1 MSMg01no125_f15.b1 CHROMAT_FILE:
MSMg01no125_f15.b1 PHD_FILE: MSMg01no125_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:22 2005
(462 letters)
>mm_chr15_76179401_76180262
Length = 862
Score = 862 bits (446), Expect = 0.0
Identities = 458/462 (99%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 agaacagtattaagggttgggtacacacatctggcaaatgaacgacaagagaaagtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacagtattaagggttgggtacacacatctggcaaatgaacgacaagagaaagtctct 260
Query: 61 ctttcaatgctaaggtacccaggtctcatgtcaggctcagggcttcctccggtgtttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttcaatgctaaggtacccaggtctcatgtcaggctcagggcttcctccggtgtttgtg 320
Query: 121 ggctttcctacctcttaccagggcactatctacatcagtggttctcaacttgtgggtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctttcctacctcttaccagggcactatctacatcagtggttctcaacttgtgggtttc 380
Query: 181 aatgctttgggagtggaatgaccctttcacaggggtcacctaagaccactggaaaacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgctttgggagtggaatgaccctttcacaggggtcacctaagaccactggaaaacata 440
Query: 241 cttacacattatctatttataacagcggcagaattacagctattaaagtagcaatgaaaa 300
||||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 441 cttacacatta-caatttataacagcggcaaaattacagttattaaagtagcaatgaaaa 499
Query: 301 taaatgtatggctgggggccatactgtattaaaactatattaaaaggttgaagcattagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaatgtatggctgggggccatactgtattaaaactatattaaaaggttgaagcattagg 559
Query: 361 aaggttgtgaaccactggtctacatccaaggccctcttttctctatgcttctcctggtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaggttgtgaaccactggtctacatccaaggccctcttttctctatgcttctcctggtga 619
Query: 421 ctttgggtgacttctccaactcccagtctttacctctccaga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttgggtgacttctccaactcccagtctttacctctccaga 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_f15.g1 MSMg01no125_f15.g1 CHROMAT_FILE:
MSMg01no125_f15.g1 PHD_FILE: MSMg01no125_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:22 2005
(436 letters)
>mm_chr15_76323650_76324485
Length = 836
Score = 812 bits (420), Expect = 0.0
Identities = 432/436 (99%)
Strand = Plus / Minus
Query: 1 gctatgtacacattagagctgtgagcatgctcaggaagacctatgaaggccataagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gctatgtacacattagagctgtgagcatgctcaggaagacctatgaaggccataagcttg 725
Query: 61 ctctccttctggcatgaaggagaagcaggatagaaagttgggttgtcacttgcaggctaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctctccctctggcatgaaggagaagcaggatagaaagttgggttgtcacttgcaggctaa 665
Query: 121 atgttaaagataggagtcagcatatacagagaggccccaggaaagactggctccagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 atgttaaagataggagtcagcatatacagagaggccccaggaaagactggctccagtttt 605
Query: 181 taaaggaaatttccgctcgactttattaagtcagaaggacaaagtgcaatggccaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 taaaggaaatttccgctcgactttattaagtcagaaggacaaagtgcaatggccaccaag 545
Query: 241 aacacaattatgacataattagtctaggaaagtcacaagaaccaacaatgacacaatgac 300
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 544 aacacaattaggacataattagtctagggaagtcacaagaaccaacaatgacacaatgac 485
Query: 301 aaaagtgagagatgaggggacagtgcgctttcccactgagtcaaaaacaacaaggcattt 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 484 aaaagtgagagatgaggggacaatgcgctttcccactgagtcaaaaacaacaaggcattt 425
Query: 361 aagcaaagcttcggctgggactggtgtgatggctcagcaggcaaccactgccaagcccga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aagcaaagcttcggctgggactggtgtgatggctcagcaggcaaccactgccaagcccga 365
Query: 421 cagcctgggttcaatc 436
||||||||||||||||
Sbjct: 364 cagcctgggttcaatc 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
