Query= MSMg01no127_n20.b1 MSMg01no127_n20.b1 CHROMAT_FILE:
MSMg01no127_n20.b1 PHD_FILE: MSMg01no127_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:46 2005
(156 letters)
>mm_chr15_47948664_47949219
Length = 556
Score = 261 bits (135), Expect = 1e-74
Identities = 150/155 (96%)
Strand = Plus / Minus
Query: 1 tatttagcagcaatctttggaggagacaattacatctttaaataaaagcaacatttatat 60
|||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tatttagcagtaatcctcggaggagacaattacatctttaaataaaagcaacatttatat 296
Query: 61 gggagttttaaatgcatgtatttgcaatattgtatcatcattatctttgtgtgcaccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 295 gggagttttaaatgcatgtatttgcaatattgtatcatcattatctttgtgtgtaccata 236
Query: 121 tttgcatctgtaattctaccggtaaccatacttaa 155
||||||||||||||||||||||||| |||||||||
Sbjct: 235 tttgcatctgtaattctaccggtaatcatacttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_n20.g1 MSMg01no127_n20.g1 CHROMAT_FILE:
MSMg01no127_n20.g1 PHD_FILE: MSMg01no127_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:46 2005
(256 letters)
>mm_chr15_47820104_47820759
Length = 656
Score = 219 bits (113), Expect = 2e-61
Identities = 155/169 (91%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 2 aattcttttccagaggaatcatgattgtaacaggctatgttaaagcattaatgtgcctag 61
|||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||
Sbjct: 202 aatttttttccagaggaatcatgattaaaacaggctatgttaaagcgttaatgtgggtag 261
Query: 62 aaagaataggtgagaa-cttagaaaagtacagtggttcaatatgtatacctttgtaaaat 120
|||||| |||| |||| | |||||||||| |||||| ||||||||| |||||||||||||
Sbjct: 262 aaagaagaggtaagaatc-tagaaaagtagagtggtccaatatgtagacctttgtaaaat 320
Query: 121 ggtttttatagaaggtaaaatattagccagtagccattaaatcaaaaca 169
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ggtttttatagaaggtaaaatattagccagtagccattatatcaaaaca 369
Score = 89.7 bits (46), Expect = 2e-22
Identities = 49/50 (98%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 156 attaa-atcaaaacatttaagatgaactttttgttggggcttttcttgtt 204
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attaatatcaaaacatttaagatgaactttttgttggggcttttcttgtt 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
