Query= MSMg01no128_a13.b1 MSMg01no128_a13.b1 CHROMAT_FILE:
MSMg01no128_a13.b1 PHD_FILE: MSMg01no128_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:59 2005
(633 letters)
>mm_chr15_51051160_51052192
Length = 1033
Score = 760 bits (393), Expect = 0.0
Identities = 401/405 (99%), Gaps = 4/405 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctatcatgtccttctgtcagtcagtcttgggccccacatttggcctttggtgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggaattcctatcatgtccttctgtcagtcagtcttgggccccacatttggcctttggtgt 342
Query: 64 gttagtaggaacaaaatgcctattcttctacctaaatccaggaagagattttgtgtctga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gttagtaggaacaaaatgcctattcttctacctaaatccaggaagagattttgtgtctga 282
Query: 124 tcttattcctttttgtatttatcacttttctgtttggaagtattaatttttttgtctttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcttattcctttttgtatttatcacttttctgtttggaagtattaatttttttgtctttt 222
Query: 184 gagccatttctgtcatagtatttttattttttaaaaattaaataaataaaagagtcattg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gagccatttctgtcatagtatttttattttttaaaaattaaataaataaaagagtcattg 162
Query: 244 agatggctcagtgaataaagccatctgttactaagcttgatgacttgagttcatccctga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 agatggctcagtgaataaagccatctgttactaagcttgatgacttgagttcatccctga 102
Query: 304 agtcatatgatggaatgagggaagtacaagttgtcctatatcctccttgcatgtgccttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 agtcatatgatggaatgagggaagtacaagttgtcctatatcctccttgcatgtgccttg 42
Query: 364 gtaggtatacgcatcccctttccctgtggaaggctttctcagcct 408
||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 41 gta--tat--gcatcccctttccctgtggaaggctttctcagcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_a13.g1 MSMg01no128_a13.g1 CHROMAT_FILE:
MSMg01no128_a13.g1 PHD_FILE: MSMg01no128_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:00 2005
(149 letters)
>mm_chr15_50971335_50971883
Length = 549
Score = 279 bits (144), Expect = 7e-80
Identities = 147/148 (99%)
Strand = Plus / Plus
Query: 1 ttcgagacgggtgaagaatgccttgaaaagaaaagatgagatgccttatcaagttacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcgagacgggtgaagaatgccttgaaaagaaaagatgagatgccttatcaagttacacc 260
Query: 61 tgtcatcctcatcaatggtgagcattcgatttcatctaaaaggagatgggggtggggatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tgtcatcctcatcaatggtgagcattcgatttcatctaaaaggagatgggggtgcggatg 320
Query: 121 ggggatgggacacgtaggacgcactatg 148
||||||||||||||||||||||||||||
Sbjct: 321 ggggatgggacacgtaggacgcactatg 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
