Query= MSMg01no128_o23.b1 MSMg01no128_o23.b1 CHROMAT_FILE:
MSMg01no128_o23.b1 PHD_FILE: MSMg01no128_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:11 2005
(467 letters)
>mm_chr15_66758736_66759602
Length = 867
Score = 843 bits (436), Expect = 0.0
Identities = 460/468 (98%), Gaps = 1/468 (0%)
Strand = Plus / Minus
Query: 1 tgtctcca-cataagtaagacagagcaacaggacagattatcctctagccccacagcaca 59
|||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||
Sbjct: 855 tgtctccagcataagtaagacagagcaaaaggacagattatcctctagcccaagagcaca 796
Query: 60 aaaatatattcgcacaagaaggggcacttgacttctgtggccgtcctccagctaaggaaa 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aaaatgtattcgcacaagaaggggcacttgacttctgtggccgtcctccagctaaggaaa 736
Query: 120 accttatacagatctcacgtgagtcttggcaatggtgttttataacagcaataaaaaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 accttatacagatctcacgtgagtcttggcaatggtgttttataacagcaataaaaaagt 676
Query: 180 aactaagatgggctccaaagaatcagtgaagttgagttgatgaattaacagtgacatcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aactaagatgggctccaaagaatcagtgaagttgagttgatgaattaacagtgacatcat 616
Query: 240 ttattgacggacaattccattggtacagataccattgtcattcatccttgctctgagaag 299
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 615 ttattgacggacaagtccattggtacagataccattgtcatttatccttgctctgagaag 556
Query: 300 tgatccctgaatggtctgcattcctaggaagcaaggagatttgcagatatgaaaagtgct 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgatccctgaatggtcagcattcctaggaagcaaggagatttgcagatatgaaaagtgct 496
Query: 360 gatgcatgctgtatactaccttattttcctcactcataaactagtgattatttttttaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gatgcatgctgtatactaccttattttcctcactcataaactagtgattatttttttaag 436
Query: 420 aatgtatattatatttattgagtgtgtatttgtgtgtgtgcaggtgtg 467
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatgtatattatatttattgagtgtgtatttgtgtgtgtgcaggtgtg 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_o23.g1 MSMg01no128_o23.g1 CHROMAT_FILE:
MSMg01no128_o23.g1 PHD_FILE: MSMg01no128_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:11 2005
(194 letters)
>mm_chr15_66613195_66613788
Length = 594
Score = 368 bits (190), Expect = e-106
Identities = 193/194 (99%)
Strand = Plus / Plus
Query: 1 tcttcctatgggcatgaggaatgggggttctaaaacatagaaccccaacaactggatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcctatgggcatgaggaatgggggttctaaaacatagaaccccaacaactggatgag 260
Query: 61 tcaagactgtctatctgagaagtttttccagtagagctgcctcctccctctcctgttttc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaactgtctatctgagaagtttttccagtagagctgcctcctccctctcctgttttc 320
Query: 121 tccctcactaccctatactttcctgtggcttagcatggccatctaatgcccacgtgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctcactaccctatactttcctgtggcttagcatggccatctaatgcccacgtgactt 380
Query: 181 caatacccctgagt 194
||||||||||||||
Sbjct: 381 caatacccctgagt 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
