Query= MSMg01no128_p22.b1 MSMg01no128_p22.b1 CHROMAT_FILE:
MSMg01no128_p22.b1 PHD_FILE: MSMg01no128_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:16 2005
(370 letters)
>mm_chr15_27799707_27800477
Length = 771
Score = 590 bits (305), Expect = e-173
Identities = 351/367 (95%), Gaps = 3/367 (0%)
Strand = Plus / Minus
Query: 5 gaattccctatgct--tccaggctggttgtaagtgggcagttgatcccgccgctgccttt 62
|||||||||||| | | ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 570 gaattccctatg-taatgcaggctggttgtaagcaggcagttgatcccgccgccgccttt 512
Query: 63 tgagtatttggattatatgatggcattactatgcccggtttattttgtttcaagtggggg 122
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 511 tgagtatttggattatatgatggcattactatgcccggtttattttttttcaagtggggc 452
Query: 123 tttttaataacattaaaaatcaagtttaattttaggtgactgagaaaaaaaatgctacac 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 451 tttttaataacattaaaaatcaagtttaattttaggtgactgagaaaaaaaatgctccac 392
Query: 183 aaagaaccttcacaaattgctgtgacatgctgtgacacgcctctctatgcatgggagttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaagaaccttcacaaattgctgtgacatgctgtgacacgcctctctatgcatgggagttt 332
Query: 243 atgaagagttactttaatctaggcttaagtacacaaaatctcatggcaatagaagaagga 302
|||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||||
Sbjct: 331 atgaagagttgctttaatctaagcttaagtacacaaaaactcatggaaatagaagaagga 272
Query: 303 tctagaaagataaaatcactgggagaaattgagagaggcaagtctggcttgctttgttta 362
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 271 tctagaaagataaaatcactgggagaaactgagagaggcaaatctggcttgctttgttta 212
Query: 363 gaaagac 369
|||||||
Sbjct: 211 gaaagac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 771
Length adjustment: 9
Effective length of query: 361
Effective length of database: 762
Effective search space: 275082
Effective search space used: 275082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_p22.g1 MSMg01no128_p22.g1 CHROMAT_FILE:
MSMg01no128_p22.g1 PHD_FILE: MSMg01no128_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:16 2005
(328 letters)
>mm_chr15_27626924_27627651
Length = 728
Score = 545 bits (282), Expect = e-159
Identities = 315/330 (95%), Gaps = 11/330 (3%)
Strand = Plus / Plus
Query: 1 tctctctcattgccctctcccaccccccctccgtcttctgatgaaatctttctaagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctcattgccctctcccaccccccctccgtcttctgatgaaatctttctaagaaat 260
Query: 61 ctccctcctactttcgtgtccttttctgatgtacgtgcaacccattgatactaagactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccctcctactttcgtgtccttttctgatgtacgtgcaacccattgatactaagactga 320
Query: 121 tagagcccacgatttccagtctgctttctttattttacttacatggc-agatgtgcaggg 179
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 321 tagagcccacgatttccagtctgctttctttattttacttacatggcta-atgtgcaggg 379
Query: 180 gtggccacaacacagctcccatcccagtgctgttctgtggtcctgcttttccatcctctg 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 gtggccacaacacagctcccatcccagtgctgttctgtggtcctgattttccatcctctg 439
Query: 240 tgtcttctctgtgttttatctccaaggattcacatgtccagtgcatgatgctcagt-atg 298
|| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 440 tggcttctctgtggtttatctccaaggattcacatgtccagcgcatgatgctcagtga-- 497
Query: 299 tcagcgctgggatgctagaactctgaagaa 328
| |||||||||||||||||||||||
Sbjct: 498 --a----tgggatgctagaactctgaagaa 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
