Query= MSMg01no130_d01.b1 MSMg01no130_d01.b1 CHROMAT_FILE:
MSMg01no130_d01.b1 PHD_FILE: MSMg01no130_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:52 2005
(414 letters)
>mm_chr15_25355928_25356741
Length = 814
Score = 696 bits (360), Expect = 0.0
Identities = 363/364 (99%)
Strand = Plus / Minus
Query: 1 tggaaaaaaaaatgactgaatggatttgagtctataaaaggatctgtggtgcttgccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tggaaaaaaaaatgactgaatggatttgagtctataaaaggatctgtggtgcttgccatg 310
Query: 61 taagtagggaatggttttatgttatagaaatacatgcaactctatatatgtgtttaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taagtagggaatggttttatgttatagaaatacatgcaactctatatatgtgtttaaagg 250
Query: 121 tttacagagtatttttctcacttatttgttgcctctaaataataagacaggctggagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttacagagtatttttctcacttatttgttgcctctaaataataagacaggctggagaga 190
Query: 181 tggctcagtggttaagagcactgactgctcttcctgaggtcctgagttcaattcccagca 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 189 tggctcagtggttaagagcactgactgctcttcctgaggtcttgagttcaattcccagca 130
Query: 241 accccatggtggctcacagccatctgtaatgtggatctgatgctctcttctggtgtgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 accccatggtggctcacagccatctgtaatgtggatctgatgctctcttctggtgtgtct 70
Query: 301 gaaggcagtgacagtgtactcacataggtgaaataaataaataaaccaatcaatcttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gaaggcagtgacagtgtactcacataggtgaaataaataaataaaccaatcaatcttttt 10
Query: 361 tttt 364
||||
Sbjct: 9 tttt 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_d01.g1 MSMg01no130_d01.g1 CHROMAT_FILE:
MSMg01no130_d01.g1 PHD_FILE: MSMg01no130_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:52 2005
(619 letters)
>mm_chr15_25205764_25206781
Length = 1018
Score = 1135 bits (587), Expect = 0.0
Identities = 611/619 (98%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 1 ttaaccaccatgtacaaatgtaaatcatgggcctttccgagctctctggctctcagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaaccaccatgtacaaatgtaaatcatgggcctttccgagctctctggctctcagttaa 260
Query: 61 cctttctggactttatagagccaagatgcaaatggaggtcatcgaaggccaaggtcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttctggactttatagagccaagatgcaaatggaggtcatcgaaggccaaggtcccct 320
Query: 121 ccatccagttcattattctctcctaatcatggagttaaccagccaggacaattagttttc 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaccagttcattattctctcctaatcatggagttaaccagccaggacaattagttttc 380
Query: 181 ttatttccactaatcatgcaggcagggtcattacacgttctctagtttcactttaagcag 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ttatttccactaatcatgcaggcagggtcattacgcgttctctagtttcactttaagcag 440
Query: 241 ttactcaacagaagcagtaatccaacaccctgggcagctttctttcgcagtgtgcctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttactcaacagaagcagtaatccaacaccctgggcagctttctttcgcagtgtgcctggg 500
Query: 301 taattgaaatttaaaaaaaatctctttgttcaccaattattaatcatctacatgttataa 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taattgaaatt-aaaaaaaatctctttgttcaccaattattaatcatctacatgttataa 559
Query: 361 aagaattattaagcacacttaatattaacccagtatgttcatcatgttacaaaaaggaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagaattattaagcacacttaatattaacccagtatgttcatcatgttacaaaaaggaca 619
Query: 421 ggaagggaaaaaaatgaatctgcattcaatagtaaatgcctgggactcgctcgcccaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaagggaaaaaaatgaatctgcattcaatagtaaatgcctgggactcgctcgcccaaac 679
Query: 481 agatagcaaaaacaccagtgaaccttgaagaagagtcaggttactgctctagaattaaaa 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 680 agatagcaaaaacaccagtgaaccttgaagaagagtcagattactgctctagaattaaaa 739
Query: 541 gggccgctattacaagttaattgaatataaattgattatacaaaaaaccttttgtggagt 600
|||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||
Sbjct: 740 gggctgctattacaagttaattgaatattaattgattatacaaagaaccatttgtggagt 799
Query: 601 ctttatagggtgtgaagat 619
|||||||||||||||||||
Sbjct: 800 ctttatagggtgtgaagat 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
