Query= MSMg01no130_j07.b1 MSMg01no130_j07.b1 CHROMAT_FILE:
MSMg01no130_j07.b1 PHD_FILE: MSMg01no130_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:26 2005
(389 letters)
>mm_chr15_42371623_42372411
Length = 789
Score = 654 bits (338), Expect = 0.0
Identities = 372/388 (95%), Gaps = 11/388 (2%)
Strand = Plus / Plus
Query: 12 tctctcttgtgatttactgtga-tccacagcaagttaaagcatacatttaatgcaacaag 70
||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 203 tctctcttgtgttttactgtgactc-acagcaagttaaagcatacatttaatgcaacaag 261
Query: 71 gagctactatcaaacatatacacatagatacagaccatatacacaccacacacacaaaca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagctactatcaaacatatacacatagatacagaccatatacacaccacacacacaaaca 321
Query: 131 cagtctcacacaca---gtctctctctctctctctctctctctctctctctctctctctc 187
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cagtctcacacacacaagtctctctctctctctctctctctctctctctctctctctctc 381
Query: 188 tctctcacacac------acacacacacacacacacacacacacacacacacacaagtaa 241
|||||| | | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctctctctctctgtctcacacacacacacacacacacacacacacacacacacaagtaa 441
Query: 242 aaagtttacaaaaagacacttatcataatagtatagggacatctgaagctcaaatctgct 301
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaagtttacaaaaagatacttatcataatagtatagggacatctgaagctcaaatctgct 501
Query: 302 actctgatttccattcatttttgcttcttttatactataaagctcaactcaatgccttga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 actctgatttccattcatttttgcttcttttatactataaagctcaactcaatgccttga 561
Query: 362 aattttttctcagcctactaaactagtt 389
||||||||||||||||||||||||||||
Sbjct: 562 aattttttctcagcctactaaactagtt 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_j07.g1 MSMg01no130_j07.g1 CHROMAT_FILE:
MSMg01no130_j07.g1 PHD_FILE: MSMg01no130_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:26 2005
(624 letters)
>mm_chr15_42474478_42475502
Length = 1025
Score = 1154 bits (597), Expect = 0.0
Identities = 618/625 (98%), Gaps = 1/625 (0%)
Strand = Plus / Minus
Query: 1 cagtcagccgagtttgtgaag-atacaaaccccagctcccctaatacacgcttaaaggtg 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cagtcagccgagtttgtgaagtatacaaaccccagctcccctaatacacgcttaaaggtg 766
Query: 60 gagctaccagttgtaatttgtagtttgactttcaaaaagagagatggaaattggaaaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gagctaccagttgtaatttgtagtttgactttcaaaaagagagatggaaattggaaaaaa 706
Query: 120 acccattttttaaaattttcttgttaatggtactactttaaattggccagtatcagtttt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ccccattttttaaaattttcttgttaatggtactactttaaattggccagtatcagtttt 646
Query: 180 gaccttagcaactattaataagggcatgtggcaacttgacttaacgtaccatctgattag 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 645 gaccttagcaactattaataagggcatgtggcaacttgacttaacctaccatctgattag 586
Query: 240 aatattttccagtgatgtttaatgtcctttgaaaatggcaccttatttgtttggctaact 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 585 aatattttccagtgatgtttaatgtcctttgaaaatggcaccttagttgtttggctaact 526
Query: 300 gtatatctaacagcatatctttcagtatatgctgtctatggctctagtagcacatcatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gtatatctaacagcatatctttcagtatatgctgtctatggctctagtagcacatcatga 466
Query: 360 tgaaggaaatcattattatttgtaaataaaggtaagctatggcatatgctaattattcct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgaaggaaatcattattatttgtaaataaaggtaagctatggcatatgctaattattcct 406
Query: 420 ctccagtgcataaaaatatttggagcatcctgtatttttaagagtagttctatgtagcga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 405 ctccagtgcataaaaatatttggagcatcctgtatttttaagagtagttctatctagcga 346
Query: 480 cagttttcaccaaaagtatgtgtgacatattttgttgtgtaaaattattattattcatta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cagttttcaccaaaagtatgtgtgacatattttgttgtgtaaaattattattattcatta 286
Query: 540 cataagtacattcatgataccagctatattgtattgtctaaagtgtaaacaccttatgtg 599
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 285 cataagtacattcatgataccagccatattgtattgtctaaagtgtaaacaccttatgtg 226
Query: 600 caactccactctattgtggaaaata 624
|||||||||||||||||| ||||||
Sbjct: 225 caactccactctattgtgtaaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1025
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1015
Effective search space: 623210
Effective search space used: 623210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
