Query= MSMg01no130_o18.b1 MSMg01no130_o18.b1 CHROMAT_FILE:
MSMg01no130_o18.b1 PHD_FILE: MSMg01no130_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:57 2005
(675 letters)
>mm_chr15_17721273_17722347
Length = 1075
Score = 1224 bits (633), Expect = 0.0
Identities = 665/679 (97%), Gaps = 7/679 (1%)
Strand = Plus / Minus
Query: 4 gaattccttgtgtc-taccgctttaaattctagccacctcaatttctgtgcaatggtgta 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gaattccttgtgtcaaactgctttaaattctagccacctcaatttctgtgcaatggtgta 755
Query: 63 gtgtaatctggaaggctgagccaataaaacttttcttccttatactgcttctgtcagggt 122
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gtgtaatctggaaggttgagccaataaaacttttcttccttatactgcttctgtcagggt 695
Query: 123 atttcatccaagctacacaaaatgaaatggagacctcagtcaagtatatctcaggggcaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atttcatccaagctacacaaaatgaaatggagacctcagtcaagtatatctcaggggcaa 635
Query: 183 actgatgatggtcttatacctccctgatgaattcctggctaatgatagattttcatcagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 actgatgatggtcttatacctccctgatgaattcctggctaatgatagattttcatcagg 575
Query: 243 ggcaactgtcaccttcatttgcatggttccaaaccaatgatcatacagacagctctggtt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggcaactgtcaccttcatttgcatggttccaaaccaatgatcatacagacagctctggtt 515
Query: 303 cagctcagtgggtcacaaagcaaaatgaaaatacatgaatgttagaaagaaactgtagag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cagctcagtgggtcacaaagcaaaatgaaaatacatgaatgttagaaagaaactgtagag 455
Query: 363 aagaatggcccgcacaaagtcagaatgacgtgggaaagggaaggcattgattagagaaag 422
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagaatggggtggacaaagtcagaatgacgtgggaaagggaaggcattgattagagaaag 395
Query: 423 cagtatttattttaagcatattgttaaattcttcaaagaatattaaaaaaataaatgaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cagtatttattttaagcatattgttaaattcttcaaagaatattaaaaaaataaatgaat 335
Query: 483 aaataaatcacttgcttttcaccagaaataaaatgacttggctatgctttgttgaaacta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaataaatcacttgcttttcaccagaaataaaatgacttggctatgctttgttgaaacta 275
Query: 543 tattttaatgcttagctttttagagtgtttgtgagctgaagaaagtatatatga------ 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tattttaatgcttagctttttagagtgtttgtgagctgaagaaagtatatatgaatatat 215
Query: 597 atatatatatatatatatatatattctttgtggcactcaagacatacatacacaaccctt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atatatatatatatatatatatattctttgtggcactcaagacatacatacacaaccctt 155
Query: 657 cagtcacaatatttaccat 675
|||||||||||||||||||
Sbjct: 154 cagtcacaatatttaccat 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_o18.g1 MSMg01no130_o18.g1 CHROMAT_FILE:
MSMg01no130_o18.g1 PHD_FILE: MSMg01no130_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:57 2005
(155 letters)
>mm_chr15_17642106_17642659
Length = 554
Score = 284 bits (147), Expect = 1e-81
Identities = 153/155 (98%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 1 agacaggggtctatcattttgctgtgtattatgtcaagtagtaaatatttatgttgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacaggggtctatcattttgctgtgtattatgtcaagtagtaaatatttatgttgtggc 260
Query: 61 agccacatatgctctgtgttacagttatttagctctcatatttgtatggaaaaaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 agccacatatgctctgtgttacagttatttagctctcatatttgtatgggaaaaaagaaa 320
Query: 121 aaaaactagagcatttggttgtatttaaatcgaaa 155
|||| ||||||||||||||||||||||||||||||
Sbjct: 321 aaaa-ctagagcatttggttgtatttaaatcgaaa 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 554
Length adjustment: 8
Effective length of query: 147
Effective length of database: 546
Effective search space: 80262
Effective search space used: 80262
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
