Query= MSMg01no133_b10.b1 MSMg01no133_b10.b1 CHROMAT_FILE:
MSMg01no133_b10.b1 PHD_FILE: MSMg01no133_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(244 letters)
>mm_chr15_57496408_57497051
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%), Gaps = 2/245 (0%)
Strand = Plus / Plus
Query: 1 cactaggattaaaagtttaccacaaacagatttttaaatttgattttc-gagcattaaac 59
||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 201 cactaggattaaaagtttaccacaaacagatttttaaatttgagtt-ctgagcattaaac 259
Query: 60 ttgggtctttgtgctctcaaggcaagcactttctgaccaaattgtatccctagcccctgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgggtctttgtgctctcaaggcaagcactttctgaccaaattgtatccctagcccctgc 319
Query: 120 ctctagaatcttgtcctccagatgtggctgaagtagctgaagatgagttgacacaggccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctctagaatcttgtcctccagatgtggctgaagtagctgaagatgagttgacacaggccc 379
Query: 180 caagttactcatgatgggtgatttaaaaaaaatgggagcaactctaaggtctgtcactgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caagttactcatgatgggtgatttaaaaaaaatgggagcaactctaaggtctgtcactgg 439
Query: 240 agaat 244
|||||
Sbjct: 440 agaat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no133_b10.g1 MSMg01no133_b10.g1 CHROMAT_FILE:
MSMg01no133_b10.g1 PHD_FILE: MSMg01no133_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(240 letters)
>mm_chr15_57661620_57662259
Length = 640
Score = 410 bits (212), Expect = e-119
Identities = 227/232 (97%)
Strand = Plus / Minus
Query: 1 aggaaagagacctttctttccttaaatcgcttctcatcaggtatttgcctgcaacaagaa 60
||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 510 aggaaagagccctttctttccttaaatcacttctcatcaggtatttggttgcaacaagaa 451
Query: 61 aggtaactgttacaatatgcagcagtgtggtgtgtaaagtatggaagttccttagaaaca 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aggtaactgttacaataggcagcagtgtggtgtgtaaagtatggaagttccttagaaaca 391
Query: 121 aacaagcaacaacaacaaaatccagccaccctccaccacaacatcaaacaaaacaaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aacaagcaacaacaacaaaatccagccaccctccaccacaacatcaaacaaaacaaaaac 331
Query: 181 ctaaaaacagagctctagctctctgatctagctctatagccaaaggactcaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctaaaaacagagctctagctctctgatctagctctatagccaaaggactcaa 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
