Query= MSMg01no134_a24.b1 MSMg01no134_a24.b1 CHROMAT_FILE:
MSMg01no134_a24.b1 PHD_FILE: MSMg01no134_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:06 2005
(267 letters)
>mm_chr15_59324298_59324964
Length = 667
Score = 480 bits (248), Expect = e-140
Identities = 254/256 (99%)
Strand = Plus / Plus
Query: 1 gtatttctgagaagttagattttctcatttcctatacaaactactcccaagcattcctgt 60
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 201 gtatttctgagaagttagattttctcattttctatacaaactactcctaagcattcctgt 260
Query: 61 tatatcctgttactcccttgtatcatctctagtttcctttagctggttataaaactctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatcctgttactcccttgtatcatctctagtttcctttagctggttataaaactctaa 320
Query: 121 tttagaaggattcacattttatattgtgactgttaaatcctcttcatcatgatttttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttagaaggattcacattttatattgtgactgttaaatcctcttcatcatgatttttata 380
Query: 181 caaattggagttagcatgaaccagatgggtttgtttagtattgattggttgattgattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaattggagttagcatgaaccagatgggtttgtttagtattgattggttgattgattga 440
Query: 241 ttgattgattgattga 256
||||||||||||||||
Sbjct: 441 ttgattgattgattga 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_a24.g1 MSMg01no134_a24.g1 CHROMAT_FILE:
MSMg01no134_a24.g1 PHD_FILE: MSMg01no134_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:06 2005
(624 letters)
>mm_chr15_59465502_59466522
Length = 1021
Score = 1096 bits (567), Expect = 0.0
Identities = 610/625 (97%), Gaps = 5/625 (0%)
Strand = Plus / Minus
Query: 1 agccatccagaaggcagaataatgtgacagcagtgaccagctctttatagttactgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 agccatccagaaggcagaataatgtgacagcagtgaccagctctttatagttactgaaca 857
Query: 61 -ttccatttaaagtgtcatgatggacgggtatgagggttgcacacctgtgggcacacagg 119
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gtt-catttaaagtgtcatgatggacgggtatgagggttgcacacctgtgggcacacagg 798
Query: 120 gcttggagagatggctcagtggttaagagcactgactgctcttccagaggtcctgagttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gcttggagagatggctcagtggttaagagcactgactgctcttccagaggtcctgagttc 738
Query: 180 aattcccagcaaccacatggtgtttcacaaccatctgtaatgggatccaatgccctcttc 239
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 737 aattcccagcaaccacatggtggctcacaaccatctgtaatgggatccaatgccctcttc 678
Query: 240 tggtgtgtctgaagacagctacgatgtactcatatacataaaattaaataaataataaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tggtgtgtctgaagacagctacgatgtactcatatacataaaattaaataaataataaaa 618
Query: 300 attatataaaaaataagaggctgacacaggaagattgacttgacccagtcaaggggaaaa 359
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aatatataaaaaataagcggctgacacaggaagattgacttgacccagtcaaggggaaaa 558
Query: 360 aaagaaagaaaaaaaacccaccatgaacacaaacaacaacaaaaaataaacaagaaagtg 419
|||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaggaa-aaaaaaaac--actatgaacacaaacaacaacaaaaaataaacaagaaagtg 501
Query: 420 gaatgcagatgtagcctagctggtagaaagcttgaatgtagaaaacttgaatgaaagcct 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 gaatgcagatgtagcctagctggtagaaagcttgaatgtagaaagcttgaatgaaagcct 441
Query: 480 gactagtgtcaaataggcttgggggtacatgattccaatccctgaactctggaggctgag 539
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 gactagtgtcaaataggcttgggggtacatgatttcaatccctgaactctggaggctgag 381
Query: 540 ggaagaggttacagtcaaggttatccctagtgacgtgaaacactctcaaaagaaggagag 599
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 ggaagaggttacggtcaaggttatccctggtgacgtgaaacactctcaaaagaaggagag 321
Query: 600 gggaagcagtgtgtacttcaagttg 624
|||||||||||||||||||||||||
Sbjct: 320 gggaagcagtgtgtacttcaagttg 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1021
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1011
Effective search space: 620754
Effective search space used: 620754
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
