Query= MSMg01no134_n10.b1 MSMg01no134_n10.b1 CHROMAT_FILE:
MSMg01no134_n10.b1 PHD_FILE: MSMg01no134_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:39 2005
(327 letters)
>mm_chr15_22743187_22743916
Length = 730
Score = 590 bits (305), Expect = e-173
Identities = 322/329 (97%), Gaps = 3/329 (0%)
Strand = Plus / Plus
Query: 2 agaactctaaaattaaaatgaaatcaaaaatgaaagttagatatgttcttcataagagaa 61
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 202 agaactctaaaattaaaatgaaatctaaaataaaagttagatatgttcttcataagagaa 261
Query: 62 aaacaatattacaaatcctttctttggtttgttataacagggttatttattacattcaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaacaatattacaaatcctttctttggtttgttataacagggttatttattacattcaaa 321
Query: 122 taaatatgttaataaggcaaaaagacttgcttcttggtagtagcttcaggctaatcattt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taaatatgttaataaggcaaaaagacttgcttcttggtagtagcttcaggctaatcattt 381
Query: 182 tctaaataaagaatatttgctgattattaccttttttt---gccaaatatcagttccacg 238
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 382 tctaaataaaggatatttgctgattattaccttttttttttgccaaatatcagttccacg 441
Query: 239 tagctaagctgtacattctattgaggataggatatcctgtatgcgtgcacatgtgcatgg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tagctaagctgtacattctattgaggataggatatcctgtatgcgtgcacatgtgcatgg 501
Query: 299 agcacagaaggaaaggcacctgctgtttg 327
||||| |||||||||||||||||||||||
Sbjct: 502 agcacggaaggaaaggcacctgctgtttg 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 730
Length adjustment: 9
Effective length of query: 318
Effective length of database: 721
Effective search space: 229278
Effective search space used: 229278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_n10.g1 MSMg01no134_n10.g1 CHROMAT_FILE:
MSMg01no134_n10.g1 PHD_FILE: MSMg01no134_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:39 2005
(252 letters)
>mm_chr15_22906996_22907647
Length = 652
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Minus
Query: 1 atctatttacttatgtgctaatagttctaaaaatgtaccaaggagattaatttaatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atctatttacttatgtgctaatagttctaaaaatgtaccaaggagattaatttaatgaaa 390
Query: 61 aataagtaaagtgggtgttacatgacacagtaaccattttcataaagcatagttctgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aataagtaaagtgggtgttacatgacacagtaaccattttcataaagcatagttctgggg 330
Query: 121 attattgtagtgaagatgtattatttcatttttcttggaacttcttaggattgggccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 attattgtagtgaagatgtattatttcatttttcttggaacttcttaggattgggccaag 270
Query: 181 aaaatactgtatctagtgttattttttcaccacagcgcctcagtaagttgataacatctc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaaatactgtatctagtgttacaatttcaccacagcgcctcagtaagttgataacatctc 210
Query: 241 tttttctac 249
|||||||||
Sbjct: 209 tttttctac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
